Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321F09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL590342-3|CAC35860.1|  421|Caenorhabditis elegans Hypothetical ...    28   3.5  
AL032622-5|CAA21500.1|  421|Caenorhabditis elegans Y66A7A.6 prot...    28   3.5  
AF031842-1|AAC13678.1|  421|Caenorhabditis elegans GLY8 protein.       28   3.5  
AF025472-6|AAB71077.1|  441|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>AL590342-3|CAC35860.1|  421|Caenorhabditis elegans Hypothetical
           protein Y66A7A.6 protein.
          Length = 421

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 231 TEHKCSHNVLFMVVEQETRSNDWG 160
           TE KC+H +   + E E++ ++WG
Sbjct: 47  TERKCNHTLKENLTEAESKKSEWG 70


>AL032622-5|CAA21500.1|  421|Caenorhabditis elegans Y66A7A.6
           protein.
          Length = 421

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 231 TEHKCSHNVLFMVVEQETRSNDWG 160
           TE KC+H +   + E E++ ++WG
Sbjct: 47  TERKCNHTLKENLTEAESKKSEWG 70


>AF031842-1|AAC13678.1|  421|Caenorhabditis elegans GLY8 protein.
          Length = 421

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 231 TEHKCSHNVLFMVVEQETRSNDWG 160
           TE KC+H +   + E E++ ++WG
Sbjct: 47  TERKCNHTLKENLTEAESKKSEWG 70


>AF025472-6|AAB71077.1|  441|Caenorhabditis elegans Hypothetical
           protein ZK250.8 protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 405 ILIDHQ*RCKSR*YSIEHEYLYRSVE*QNGRNML 506
           +L D Q  CKSR +SIE E+ ++ V   NGR++L
Sbjct: 329 LLCDKQ-LCKSRKWSIETEFQFKIVS-SNGRSLL 360


>AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical
           protein R52.3 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 429 CKSR*YSIEHEYLYRSVE*QNGRNMLF 509
           CKSR +SIE EY  + V   NGR+ LF
Sbjct: 275 CKSRKWSIETEYQLKIVS-PNGRSELF 300


>Z81476-4|CAB03923.1|  707|Caenorhabditis elegans Hypothetical
           protein C25F9.5 protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 446 ILPTFTPSLMIYENIILLYK 387
           +LPT+TPS +IY+  +LL K
Sbjct: 543 LLPTYTPSYIIYDFDVLLTK 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,651,140
Number of Sequences: 27780
Number of extensions: 201158
Number of successful extensions: 495
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)