Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321F08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-3|CAA99955.2|  533|Caenorhabditis elegans Hypothetical pr...    28   3.5  

>Z75554-3|CAA99955.2|  533|Caenorhabditis elegans Hypothetical
           protein ZC455.4 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 274 PQKSFPAHVIVYGRLG-LWRPHQLLFFYGFRQLFQL*SAYRQVQGSSTGT*KH 429
           P   +     ++ RL  +W  H++   YGF QLF++   Y+QV   + G  KH
Sbjct: 195 PTSQYGHESTIFDRLNDVW--HKIWSSYGFAQLFEM--QYQQVSKLTNGKVKH 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,972,301
Number of Sequences: 27780
Number of extensions: 249744
Number of successful extensions: 747
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)