Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321F04f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 111 8e-26
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 78 9e-16
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 76 3e-15
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 58 8e-10
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 51 1e-07
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 41 1e-04
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 40 3e-04
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 36 0.005
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 32 0.045
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 3.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.9
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 25 5.2
SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyc... 25 9.0
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 111 bits (266), Expect = 8e-26
Identities = 54/93 (58%), Positives = 63/93 (67%)
Frame = +2
Query: 239 KGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 418
+GPKVT V FD++ GD+ +G + IGLFGKTVPKT ENF LA +G GY+GS FHRVI
Sbjct: 21 RGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVI 80
Query: 419 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKL 517
NFMIQ +SIYG RF DENFKL
Sbjct: 81 PNFMIQGGDITKGDGTGGKSIYGSRFPDENFKL 113
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 77.8 bits (183), Expect = 9e-16
Identities = 45/91 (49%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +2
Query: 260 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNF 427
K+S D KI TI LF VPKT +NF L E +G YKGS+FHRVIKNF
Sbjct: 8 KISIDGKIQP----TIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNF 63
Query: 428 MIQXXXXXXXXXXXXRSIYGERFEDENFKLK 520
M+Q SIYGE+FEDENF+LK
Sbjct: 64 MLQGGDFTRGNGTGGESIYGEKFEDENFELK 94
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 76.2 bits (179), Expect = 3e-15
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 269 FDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXX 448
FD+ +G IV LF VPKT NF L +G GY GS FHRVI FM+Q
Sbjct: 6 FDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDF 65
Query: 449 XXXXXXXXRSIYGERFEDENFKLK 520
+SIYGE+F DENF LK
Sbjct: 66 TRGNGTGGKSIYGEKFPDENFALK 89
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 58.0 bits (134), Expect = 8e-10
Identities = 40/95 (42%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Frame = +2
Query: 263 VSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVI 418
V D+ I +G I I LF VPKT ENF Q QKP G YK S FHR+I
Sbjct: 7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRII 64
Query: 419 KNFMIQXXXXXXXXXXXXRSIYGER-FEDENFKLK 520
+ FMIQ +I+ R F DENF LK
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLK 99
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 50.8 bits (116), Expect = 1e-07
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +2
Query: 293 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 472
++G I+I L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQ-GGDPTGTGRGG 64
Query: 473 RSIYGERFEDE 505
SIYG++F+DE
Sbjct: 65 TSIYGDKFDDE 75
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 40.7 bits (91), Expect = 1e-04
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = +2
Query: 299 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 478
G I I L+ + PK +NF A E Y + FHR+IKNFMIQ S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQ-GGDPLGDGTGGES 519
Query: 479 IYGERFEDE 505
I+ + FEDE
Sbjct: 520 IWKKDFEDE 528
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 39.5 bits (88), Expect = 3e-04
Identities = 29/69 (42%), Positives = 33/69 (47%)
Frame = +2
Query: 299 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 478
G I I L+ K VPK NF QL EG Y G+ HRV+ F+IQ S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQ-GGDPTGTGMGGES 77
Query: 479 IYGERFEDE 505
IYGE F E
Sbjct: 78 IYGEPFAVE 86
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 35.5 bits (78), Expect = 0.005
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +2
Query: 293 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 472
N G I I L P NF QLA++ Y+ + FHR I FMIQ
Sbjct: 283 NHGEINIELHTDYAPHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQ-GGDPSGTGRGG 338
Query: 473 RSIYGERFEDE 505
+SI+G+ F+DE
Sbjct: 339 QSIWGKPFKDE 349
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 32.3 bits (70), Expect = 0.045
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 287 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 436
+ +G +VI LF K PKT ENF +L + + Y F+ + N+ Q
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQ 52
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -2
Query: 475 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLRYSLS 323
+PSS + L K+ LDH + + S P P +++ K+ S L+ + S
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSS 236
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 3.9
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 285 PIFMSKLTL*VTLG-PLGISSDLALAMNNKIPKAIVRVPMIKTSLVRFL 142
PIF KL + +TLG L ISS + + KA V ++ TS + FL
Sbjct: 3530 PIFQGKLDMAITLGHKLSISSAKLSTICRSVLKASVNSALL-TSWICFL 3577
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 157 FSSFPCYFYKIRFECLFFQNLRY 89
FSSF F+++ F C FF L Y
Sbjct: 11 FSSFESLFFRLFFVCSFFFPLLY 33
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 113 TFETNFVKIARKRTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKV 265
TF N+ IA+K + V I+G + ++ S +SD I K ++
Sbjct: 119 TFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRM 169
>SPAC26A3.02 |myh1|myh|adenine DNA glycosylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 308 VIGLFGKTVPKTTENFFQLAQKP 376
++ +F KT P T E FF + ++P
Sbjct: 302 LVVIFQKTDPSTKEKFFLIRKRP 324
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,060,194
Number of Sequences: 5004
Number of extensions: 40155
Number of successful extensions: 115
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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