Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321F03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   6.2  

>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 268 RTCMAKLICLSRDRRVIHRAFRSVEGAWLYG 360
           R+C+ K + +     VI R  R  E  W YG
Sbjct: 467 RSCIGKRLAMMEMEIVIARLVRRYEVGWNYG 497


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 229 SRPTIXQXEAXRRSSFLEFNMASFKNKSDDSN 134
           SRP +   E  +RSSF   +M   + +  + N
Sbjct: 229 SRPQLLLLELCKRSSFRSLSMHKRRTRKQNKN 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,699
Number of Sequences: 2352
Number of extensions: 7371
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)