Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321F03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33460-1|AAC99959.1| 1717|Homo sapiens DNA-directed RNA polymera... 103 3e-22
BC126303-1|AAI26304.1| 1720|Homo sapiens polymerase (RNA) I poly... 103 3e-22
BC117173-1|AAI17174.1| 1720|Homo sapiens polymerase (RNA) I poly... 103 3e-22
BC017115-1|AAH17115.2| 574|Homo sapiens POLR1A protein protein. 103 3e-22
AL117467-1|CAB55942.1| 95|Homo sapiens hypothetical protein pr... 103 3e-22
AK025568-1|BAB15171.1| 495|Homo sapiens protein ( Homo sapiens ... 103 3e-22
AC012511-1|AAY24277.1| 922|Homo sapiens unknown protein. 103 3e-22
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest... 56 8e-08
BC041089-1|AAH41089.1| 1390|Homo sapiens polymerase (RNA) III (D... 54 4e-07
AY091462-1|AAM12032.1| 299|Homo sapiens RNA polymerase III subu... 54 4e-07
AL512628-1|CAI16466.1| 1390|Homo sapiens polymerase (RNA) III (D... 54 4e-07
AF021351-1|AAB86536.1| 1391|Homo sapiens RNA polymerase III larg... 54 4e-07
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest... 52 9e-07
BC014399-1|AAH14399.1| 162|Homo sapiens POLR3A protein protein. 40 0.004
BC067781-1|AAH67781.1| 310|Homo sapiens EDG8 protein protein. 29 9.9
BC034703-1|AAH34703.1| 398|Homo sapiens endothelial differentia... 29 9.9
AY262689-1|AAP20653.1| 398|Homo sapiens G-protein coupled recep... 29 9.9
AK074661-1|BAC11119.1| 398|Homo sapiens 8. protein. 29 9.9
AF331840-1|AAL57041.1| 398|Homo sapiens SPPR protein. 29 9.9
AF317676-1|AAG38113.1| 398|Homo sapiens sphingosine 1-phosphate... 29 9.9
AB083602-1|BAB89315.1| 398|Homo sapiens putative G-protein coup... 29 9.9
>U33460-1|AAC99959.1| 1717|Homo sapiens DNA-directed RNA polymerase I,
largest subunit protein.
Length = 1717
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 1628 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 1687
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 1688 DELRSPSACLVVGKVVRGGTGLFELK 1713
>BC126303-1|AAI26304.1| 1720|Homo sapiens polymerase (RNA) I
polypeptide A, 194kDa protein.
Length = 1720
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 1631 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 1690
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 1691 DELRSPSACLVVGKVVRGGTGLFELK 1716
>BC117173-1|AAI17174.1| 1720|Homo sapiens polymerase (RNA) I
polypeptide A, 194kDa protein.
Length = 1720
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 1631 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 1690
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 1691 DELRSPSACLVVGKVVRGGTGLFELK 1716
>BC017115-1|AAH17115.2| 574|Homo sapiens POLR1A protein protein.
Length = 574
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 485 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 544
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 545 DELRSPSACLVVGKVVRGGTGLFELK 570
>AL117467-1|CAB55942.1| 95|Homo sapiens hypothetical protein
protein.
Length = 95
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 6 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 65
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 66 DELRSPSACLVVGKVVRGGTGLFELK 91
>AK025568-1|BAB15171.1| 495|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21915 fis, clone HEP03920. ).
Length = 495
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 406 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 465
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 466 DELRSPSACLVVGKVVRGGTGLFELK 491
>AC012511-1|AAY24277.1| 922|Homo sapiens unknown protein.
Length = 922
Score = 103 bits (248), Expect = 3e-22
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +3
Query: 6 VYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQXMSFESSLLFLKDAILNSKK 185
VYGI VDPRHL+L+ADYM + G+++P++R G+ ++SSPLQ M+FE+S FLK A +
Sbjct: 833 VYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSH 892
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQ 263
D+LR S L+VG++ R GTG+F+L+
Sbjct: 893 DELRSPSACLVVGKVVRGGTGLFELK 918
>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 56.0 bits (129), Expect = 8e-08
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 12 GITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSS-PLQXMSFESSLLFLKDAILNSKKD 188
G V+ RHL L+ D MT G ++R G+ + PL SFE ++ L +A + + D
Sbjct: 1390 GSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESD 1449
Query: 189 DLRXASXXLMVGRLXRTGTGVFDL 260
++ S +M+G+L GTG FDL
Sbjct: 1450 PMKGVSENIMLGQLAPAGTGCFDL 1473
>BC041089-1|AAH41089.1| 1390|Homo sapiens polymerase (RNA) III (DNA
directed) polypeptide A, 155kDa protein.
Length = 1390
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YGITVDPRHLTLIADYMTYNGIFEPMSRKGM-EASSSPLQXMSFESSLLFLKDAILNSKK 185
+G+++D RH+ L++D MTY G ++R G+ + S L SFE + L DA +K
Sbjct: 1278 HGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQK 1337
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQH 266
D + S +++G GTG+F L H
Sbjct: 1338 DSVCGVSECIIMGIPMNIGTGLFKLLH 1364
>AY091462-1|AAM12032.1| 299|Homo sapiens RNA polymerase III subunit
RPC155-D protein.
Length = 299
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YGITVDPRHLTLIADYMTYNGIFEPMSRKGM-EASSSPLQXMSFESSLLFLKDAILNSKK 185
+G+++D RH+ L++D MTY G ++R G+ + S L SFE + L DA +K
Sbjct: 187 HGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQK 246
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQH 266
D + S +++G GTG+F L H
Sbjct: 247 DSVCGVSECIIMGIPMNIGTGLFKLLH 273
>AL512628-1|CAI16466.1| 1390|Homo sapiens polymerase (RNA) III (DNA
directed) (155kD) (RPC155) protein.
Length = 1390
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YGITVDPRHLTLIADYMTYNGIFEPMSRKGM-EASSSPLQXMSFESSLLFLKDAILNSKK 185
+G+++D RH+ L++D MTY G ++R G+ + S L SFE + L DA +K
Sbjct: 1278 HGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQK 1337
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQH 266
D + S +++G GTG+F L H
Sbjct: 1338 DSVCGVSECIIMGIPMNIGTGLFKLLH 1364
>AF021351-1|AAB86536.1| 1391|Homo sapiens RNA polymerase III largest
subunit protein.
Length = 1391
Score = 53.6 bits (123), Expect = 4e-07
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +3
Query: 9 YGITVDPRHLTLIADYMTYNGIFEPMSRKGM-EASSSPLQXMSFESSLLFLKDAILNSKK 185
+G+++D RH+ L++D MTY G ++R G+ + S L SFE + L DA +K
Sbjct: 1279 HGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQK 1338
Query: 186 DDLRXASXXLMVGRLXRTGTGVFDLQH 266
D + S +++G GTG+F L H
Sbjct: 1339 DSVCGVSECIIMGIPMNIGTGLFKLLH 1365
>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
subunit protein.
Length = 1970
Score = 52.4 bits (120), Expect = 9e-07
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 12 GITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSS-PLQXMSFESSLLFLKDAILNSKKD 188
G V+ RHL L+ D MT G ++R G+ + PL SFE ++ L +A + +
Sbjct: 1390 GSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESY 1449
Query: 189 DLRXASXXLMVGRLXRTGTGVFDL 260
++ S +M+G+L GTG FDL
Sbjct: 1450 PMKGVSENIMLGQLAPAGTGCFDL 1473
>BC014399-1|AAH14399.1| 162|Homo sapiens POLR3A protein protein.
Length = 162
Score = 40.3 bits (90), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 YGITVDPRHLTLIADYMTYNGIFEPMSRKGM-EASSSPLQXMSFESSLLFLKDAILNSKK 185
+G+++D RH+ L++D MTY G ++R G+ + S L SFE + L DA +K
Sbjct: 94 HGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQK 153
Query: 186 DDL 194
D +
Sbjct: 154 DSV 156
>BC067781-1|AAH67781.1| 310|Homo sapiens EDG8 protein protein.
Length = 310
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>BC034703-1|AAH34703.1| 398|Homo sapiens endothelial
differentiation, sphingolipid G-protein-coupled
receptor, 8 protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>AY262689-1|AAP20653.1| 398|Homo sapiens G-protein coupled receptor
EDG8 protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>AK074661-1|BAC11119.1| 398|Homo sapiens 8. protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>AF331840-1|AAL57041.1| 398|Homo sapiens SPPR protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>AF317676-1|AAG38113.1| 398|Homo sapiens sphingosine 1-phosphate
receptor Edg-8 protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
>AB083602-1|BAB89315.1| 398|Homo sapiens putative G-protein coupled
receptor protein.
Length = 398
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 101 GGVFVAVTANVIRIVAFVLE 160
GGVFVA+TA+V+ ++A LE
Sbjct: 113 GGVFVALTASVLSLLAIALE 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,492,564
Number of Sequences: 237096
Number of extensions: 1125058
Number of successful extensions: 1916
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1912
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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