Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321F01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0261 - 19505647-19506828                                         27   6.9  
02_05_0572 + 30082734-30082739,30083136-30083383,30083695-300838...    27   6.9  
11_01_0253 - 1939976-1940187,1940258-1940332,1940416-1940458           27   9.1  

>05_04_0261 - 19505647-19506828
          Length = 393

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 281 VCHVALDDGGAVAVSERARFRQGSDADILKSV 186
           V  V L    A  +S +ARFR  +DA+ + S+
Sbjct: 62  VASVGLSPAAAARISRKARFRSNADAEAVVSL 93


>02_05_0572 +
           30082734-30082739,30083136-30083383,30083695-30083888,
           30083994-30084136
          Length = 196

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 227 AHALTQRPHRRRXAQHDKHRISTLI 301
           AH L +RPHRR+   + K R  +LI
Sbjct: 43  AHPLLRRPHRRQQPFYPKARFRSLI 67


>11_01_0253 - 1939976-1940187,1940258-1940332,1940416-1940458
          Length = 109

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 269 QHDKHRISTLIGDXMIMKREVDYSAEHYALYLKSEECEQ*SY*DRLRTQLMXDKVQ 436
           QHDK R++ ++GD +I    V Y      L  +   C +    DRL      D VQ
Sbjct: 23  QHDKGRLAGIVGDGLIGAANVGYVGG--VLLFEGTRCWESLNLDRLDPSSDRDMVQ 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,396,592
Number of Sequences: 37544
Number of extensions: 155158
Number of successful extensions: 308
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)