Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321E08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273...   232   1e-61
05_07_0194 + 28327328-28327376,28327699-28327742,28327852-283279...   229   8e-61
01_01_1031 + 8169505-8169553,8169831-8169905,8170395-8170438,817...   204   3e-53
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616...   116   1e-26
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469...    29   1.7  
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914...    29   3.0  
08_02_0103 - 12400494-12400626,12400882-12400958                       29   3.0  
06_03_0032 - 15697530-15697669,15699215-15699437,15699823-156999...    27   6.9  
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343...    27   9.1  
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344...    27   9.1  
08_02_0002 + 11173365-11173512,11173528-11178470                       27   9.1  
04_01_0502 - 6587068-6587964                                           27   9.1  
03_03_0214 + 15487367-15487388,15488220-15488375,15488690-154889...    27   9.1  
02_05_1173 - 34686009-34686090,34686276-34686342,34686707-346867...    27   9.1  

>01_06_0109 -
           26526691-26526775,26526894-26527019,26527228-26527370,
           26527521-26527555,26527676-26527791,26527868-26527936,
           26528070-26528173,26528253-26528338,26528429-26528530,
           26528609-26528662,26528763-26528840,26528936-26528973,
           26529235-26529344,26529463-26529506,26530232-26530280
          Length = 412

 Score =  232 bits (567), Expect = 1e-61
 Identities = 105/155 (67%), Positives = 127/155 (81%), Gaps = 1/155 (0%)
 Frame = +3

Query: 51  KIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAE 227
           KIK A P+V++ GDEMTRI W  IK+KLI PFLD+++  YDLG+ +RD TDD+VT++ AE
Sbjct: 5   KIKVANPIVEMDGDEMTRIFWQSIKDKLIFPFLDLDIKYYDLGVLHRDATDDKVTVEAAE 64

Query: 228 AIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 407
           A  KYNV IKCATITPDE RV+EF LK+MWKSPNGTIRNI+ GTVFRE IICKN+PRLV 
Sbjct: 65  ATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNIINGTVFREPIICKNVPRLVP 124

Query: 408 GWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFK 512
           GW KPI IGRHA  DQY+ATD V+ G G L+++F+
Sbjct: 125 GWTKPICIGRHAFGDQYRATDAVLKGPGKLKLVFE 159


>05_07_0194 +
           28327328-28327376,28327699-28327742,28327852-28327961,
           28328250-28328287,28328371-28328448,28328527-28328580,
           28328663-28328764,28329152-28329237,28329327-28329430,
           28329542-28329610,28329689-28329804,28329949-28329983,
           28330152-28330294,28330473-28330598,28330700-28330784
          Length = 412

 Score =  229 bits (561), Expect = 8e-61
 Identities = 103/156 (66%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
 Frame = +3

Query: 48  SKIK-AGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCA 224
           +KIK A P+V++ GDEMTR+ W  IK+KLI PFL++++  +DLG+  RD+TDD+VT++ A
Sbjct: 4   TKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPYRDQTDDKVTVEAA 63

Query: 225 EAIKKYNVGIKCATITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLV 404
           EA  KYNV IKCATITPDE RV+EF LK MWKSPNGTIRNIL GTVFRE IICKNIPRLV
Sbjct: 64  EATLKYNVAIKCATITPDEARVKEFSLKSMWKSPNGTIRNILNGTVFREPIICKNIPRLV 123

Query: 405 TGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIFK 512
            GW KPI IGRHA  DQY+ATD V+ G G L+++++
Sbjct: 124 PGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVYE 159


>01_01_1031 +
           8169505-8169553,8169831-8169905,8170395-8170438,
           8170633-8170742,8170960-8170997,8171055-8171186,
           8171298-8171351,8171424-8171525,8172679-8172764,
           8172870-8172973,8173056-8173124,8173156-8173209,
           8173210-8173325,8173420-8173454,8173637-8173779,
           8174105-8174227,8174305-8174398
          Length = 475

 Score =  204 bits (499), Expect = 3e-53
 Identities = 101/160 (63%), Positives = 115/160 (71%), Gaps = 18/160 (11%)
 Frame = +3

Query: 84  GDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCA 263
           GDEMTR+IW  IK+KLI PFLD+++  YDLG+ NRD T D+VTI+ AEA  KYNV IKCA
Sbjct: 42  GDEMTRVIWKWIKDKLIFPFLDLDIKYYDLGLPNRDATGDKVTIESAEATLKYNVAIKCA 101

Query: 264 TITP------------------DEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKN 389
           TITP                  DE RV+EF L  MWKSPNGTIRNIL GTVFRE IICKN
Sbjct: 102 TITPVLDTQFKFDFGRTIHEPTDEGRVKEFNLSAMWKSPNGTIRNILNGTVFREPIICKN 161

Query: 390 IPRLVTGWDKPIIIGRHAHADQYKATDFVVPGAGTLEIIF 509
           IPRLV GW KPI IGRHA  DQY+ATD V+ G G L+++F
Sbjct: 162 IPRLVPGWIKPICIGRHAFGDQYRATDTVIKGPGKLKLVF 201


>04_04_0457 +
           25359486-25359571,25360690-25360782,25361561-25361622,
           25361758-25361816,25363624-25363733,25364795-25364829,
           25365469-25365546,25365952-25366005,25366277-25366362,
           25366468-25366571,25366986-25367054,25367135-25367250,
           25367387-25367421,25367512-25367654,25367808-25367930,
           25368463-25368556
          Length = 448

 Score =  116 bits (279), Expect = 1e-26
 Identities = 53/95 (55%), Positives = 72/95 (75%)
 Frame = +3

Query: 123 EKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFK 302
           + LI P+L++++  +DLG+ NRD TDD+VT++ AEA           T+T DE RV+EFK
Sbjct: 99  DDLIFPYLELDVKYFDLGLLNRDATDDKVTVESAEATLDLYSNSFFMTLT-DETRVKEFK 157

Query: 303 LKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVT 407
           LK MW+SPNGTIRNIL GTVFRE I+CKN+PR+++
Sbjct: 158 LKSMWRSPNGTIRNILNGTVFREPILCKNVPRILS 192


>02_05_0597 +
           30245455-30245767,30246693-30246760,30246851-30246939,
           30247047-30247212,30247296-30247585,30247692-30247896,
           30248013-30248170,30248352-30248595
          Length = 510

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 418 LSHPVTSLGIFLQIIASLKTVPPRILRMVPLGLFH 314
           + H +TSL   ++I   L+ +PPR+ R V LG+FH
Sbjct: 165 VEHFITSLRDEVRI---LRELPPRVKRRVELGMFH 196


>10_06_0105 -
           10790092-10790323,10791092-10791234,10791322-10791429,
           10791796-10791903,10793133-10797686,10798347-10798461,
           10799597-10799724,10799843-10800043,10800158-10800227,
           10801233-10801314,10801433-10801556,10801761-10801778
          Length = 1960

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +3

Query: 300 KLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDK 419
           K++  W+ P   I       VFR      NIP   TGWDK
Sbjct: 69  KMEAFWRVPKWKIEKAKVKVVFRLQFHATNIPS--TGWDK 106


>08_02_0103 - 12400494-12400626,12400882-12400958
          Length = 69

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 99 WSFHHQGCQQQVQP 58
          WS HHQGCQ +  P
Sbjct: 12 WSLHHQGCQPRALP 25


>06_03_0032 -
           15697530-15697669,15699215-15699437,15699823-15699929,
           15700047-15700224,15700393-15700455,15700474-15700602,
           15701211-15701430,15702162-15702262,15702954-15703062,
           15705169-15705290,15705473-15705515,15705848-15705903,
           15705983-15706089,15706167-15706342,15706507-15706618,
           15706711-15706759,15707184-15707276,15707452-15707571,
           15707686-15707787,15709442-15709540,15710103-15710237,
           15710421-15710499,15710747-15710822,15710904-15710993,
           15711139-15711217,15711304-15711338,15711457-15711531,
           15712628-15713375
          Length = 1221

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 163 TCNSMSKKGRISFSLIRSQIILVISS 86
           TC+SMS++G I++S +  QI    SS
Sbjct: 181 TCSSMSEQGAITYSSMTEQIATASSS 206


>10_08_0451 +
           18033065-18033253,18033746-18033805,18034256-18034324,
           18034751-18034786,18035081-18035146,18035345-18035443,
           18035543-18035620,18035724-18035802,18035999-18036093,
           18036251-18036335,18036505-18036698,18036804-18036922,
           18037015-18037057
          Length = 403

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 501 FQEYQHLGQQSQLLCIDQHEHDVQ**WVCPTLL 403
           F+ Y H+G   ++L I     D +  W+CP  L
Sbjct: 49  FKAYSHIGVHEEMLKIVNENCDRKRGWMCPLFL 81


>08_02_1367 +
           26432425-26432622,26434071-26434162,26434337-26434403,
           26434519-26434638,26434792-26435023,26435525-26435606,
           26435985-26436117,26436332-26436537,26436633-26436758,
           26437208-26437907
          Length = 651

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 347 SWWYCFQGGYYLQEYTETCNRVGQTH 424
           +WWY  QG +   E  E+  R+ Q H
Sbjct: 504 NWWYADQGSFEEPEGRESLQRLWQRH 529


>08_02_0002 + 11173365-11173512,11173528-11178470
          Length = 1696

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +3

Query: 57   KAGPVVDILGDEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDK 194
            K    +   G ++  +IW   KE+ +  FL ++ + +DL +E R++
Sbjct: 1409 KTEQTLSCFGQDILDLIWQKFKERQMKIFLGLQDYFFDL-LEGRER 1453


>04_01_0502 - 6587068-6587964
          Length = 298

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -1

Query: 455 LISMSMTSNDDGFVPPCYKSRYILANNSLPENSTTKNITDGPIRAFPHFL 306
           L S+ +T   + F  P   +R+ L + SLPE+   + +T GP    P  L
Sbjct: 247 LDSLKITLGGNEFSVPFSWARFALTD-SLPEDEFAEEVTSGPPHESPETL 295


>03_03_0214 +
           15487367-15487388,15488220-15488375,15488690-15488925,
           15489013-15489132,15490466-15490480
          Length = 182

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = +3

Query: 147 DIELHVYDLGMENRDKTDDQVTID--CAEAI--KKYNVGIKCATITPDEKRVEEFKLKKM 314
           D  L++    +EN+  T   + +   CA  +  ++ NV +  A++   E R    K  + 
Sbjct: 60  DNTLNILTKEVENKMATSPCINLGDPCAARVDVQEPNVSLTNASLKKKEFRTRNLKRNRS 119

Query: 315 WKSPNGTIR 341
           W   NGT R
Sbjct: 120 WTDKNGTRR 128


>02_05_1173 -
           34686009-34686090,34686276-34686342,34686707-34686758,
           34687111-34687172,34688380-34688416
          Length = 99

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 123 EKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGI 254
           EKL+   L +EL +Y     NR+KTDD V +          +GI
Sbjct: 58  EKLLSKCLVVELFLY----RNREKTDDVVIVSALNRKPMEEIGI 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,448,570
Number of Sequences: 37544
Number of extensions: 300323
Number of successful extensions: 769
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)