Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321E07f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0969 - 12795413-12795475,12795672-12795744,12796011-127961...    30   1.3  
03_05_0372 - 23580742-23580936,23581004-23581051                       28   4.0  
11_06_0261 - 21765167-21765373,21765828-21766097,21767330-217673...    28   5.2  
11_03_0116 - 10220821-10220937,10221414-10221497,10221613-102216...    28   5.2  
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480     28   5.2  
01_01_1198 - 9643469-9643585,9643740-9643805,9643905-9644489,964...    28   5.2  
11_01_0260 - 1985258-1985794,1986874-1986990                           27   6.9  
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412...    27   6.9  
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538...    27   6.9  
07_03_0478 + 18556773-18556883,18557219-18557318,18557807-185595...    27   9.1  

>03_02_0969 -
           12795413-12795475,12795672-12795744,12796011-12796114,
           12796374-12796493,12796591-12796683,12797813-12797911,
           12798074-12798167,12798254-12798333,12798817-12799347
          Length = 418

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +1

Query: 400 HEPAIKIEYVNEAEKDSSEPELTRDSVYEEVEFLDDVPV 516
           H P +   Y+ E  KD S  E+  ++ +EE+  +DD+P+
Sbjct: 334 HVPRVLARYIAEEVKDKSNKEIDTNTWHEEL--VDDIPL 370


>03_05_0372 - 23580742-23580936,23581004-23581051
          Length = 80

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 214 AICVRTINILDNHIPNSICIFRSTFSLQFP 125
           AIC+ TI ++ N  P  +C+ R++ S QFP
Sbjct: 38  AICLVTIELV-NDTPLLLCVSRNSKSFQFP 66


>11_06_0261 -
           21765167-21765373,21765828-21766097,21767330-21767377,
           21767472-21767600,21767701-21767961,21768072-21768164,
           21768252-21768344,21769403-21769496,21769609-21770072
          Length = 552

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 325 LRESCSFRNLVIRSQKQ-LMDEISNGHEPAIKIEYVNEAEKDSSEPELTRDSVYEEVEFL 501
           + ++C +  LV  S +  L+ ++ NGHEP + +  + +         +  D + +E+E L
Sbjct: 211 IAKACFWEKLVNNSPEDALLAQLQNGHEPEVPLAVILQYLMRL----MDEDRIRKELELL 266

Query: 502 DDVP 513
             VP
Sbjct: 267 SSVP 270


>11_03_0116 -
           10220821-10220937,10221414-10221497,10221613-10221687,
           10223267-10223318,10223367-10223413,10226277-10226333,
           10226829-10226927,10229462-10229581,10229666-10229788,
           10229988-10230104
          Length = 296

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 310 PCIKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEYVN 432
           P ++ +  S SFRN+++    QL+ E++ G  P    +YV+
Sbjct: 169 PWVEFINPSESFRNIIVDYPFQLITELTRGVPPINMQKYVD 209


>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
          Length = 623

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 157 CRCCLEYGY-LKYLWSEHKWQGHTEVYGEMLTKCYAFSWIQLDSEDYN 297
           C+C ++  + +  LW    WQ  T    +  TK   +SW+ L+S+  N
Sbjct: 457 CKCKIKGSHTIVGLWKHEYWQP-TMKTSDWYTKSCTYSWVSLNSKLIN 503


>01_01_1198 -
           9643469-9643585,9643740-9643805,9643905-9644489,
           9645159-9645994,9646597-9646783,9647572-9647737,
           9648431-9648520,9649122-9649184,9649277-9649413,
           9649835-9650349,9651130-9651231,9651581-9651602
          Length = 961

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +3

Query: 171 GIWLSKIFMVRTQMARTYRGLRRNVNQMLRFFVDPVRLGGL 293
           G+W++ +    T++AR  RG++  V +++ F +D  RLG L
Sbjct: 437 GLWVNHMSPENTKVARNVRGVQVQVGRVI-FPLDDGRLGEL 476


>11_01_0260 - 1985258-1985794,1986874-1986990
          Length = 217

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 388 ISNGHEPAIKIEYVNEAEKDSSEPELT 468
           +SNGH PA    +V  A++ S +  LT
Sbjct: 51  VSNGHSPASASAWVGSAKRQSGQRRLT 77


>09_04_0107 -
           14640097-14640348,14640472-14640701,14640805-14641215,
           14641481-14643831,14643927-14644093
          Length = 1136

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 373 QLMDEISNGHEPAIKIEYVNEAEKDSSEPELTRDSVYEE 489
           Q+++E     +PAI +E   E E+D+ E E+  +   EE
Sbjct: 164 QVLEEHEPEKKPAIAMESKQERERDAEEREVVMEEEEEE 202


>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
            29254991-29255130,29255262-29255571,29255810-29255952,
            29256106-29256306,29256453-29256581,29256921-29257199,
            29258036-29259720,29261255-29261764,29261901-29262108,
            29264347-29264458,29264594-29264763
          Length = 1439

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +1

Query: 217  GHTEVYGEM-LTKCYAFSWIQLDSEDYNQICDPCIKRLRESCSFRNLVIRS-QKQLMDEI 390
            G+ E Y +   T CY ++   +  EDY   C P I++  +S   R   +   QK + + I
Sbjct: 1100 GYLEYYKQRGFTSCYIWACPPVKGEDYILYCHPEIQKTPKSDKLRQWYLSMLQKAIKENI 1159


>07_03_0478 +
           18556773-18556883,18557219-18557318,18557807-18559513,
           18559709-18560094,18560175-18560246,18560366-18560455
          Length = 821

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 177 WLSKIFMVRTQMARTY 224
           WLSK+F VRTQ A  Y
Sbjct: 479 WLSKLFEVRTQWAPVY 494


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,420,657
Number of Sequences: 37544
Number of extensions: 234220
Number of successful extensions: 586
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)