Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321E07f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51995-8|AAA96076.1|  331|Caenorhabditis elegans Dystroglycan pr...    31   0.66 
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical...    30   1.2  
AL021497-19|CAA16406.2|  989|Caenorhabditis elegans Hypothetical...    30   1.2  
AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z68337-2|CAA92746.2|  516|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81489-1|CAB04005.2|  266|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical...    27   6.2  
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical...    27   6.2  
AC084159-16|AAK39357.1|  205|Caenorhabditis elegans Hypothetical...    27   6.2  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL110487-4|CAB54427.1|  505|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U51995-8|AAA96076.1|  331|Caenorhabditis elegans Dystroglycan
           protein 3 protein.
          Length = 331

 Score = 30.7 bits (66), Expect = 0.66
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -2

Query: 142 FSLQFPFFYIIKLQFALCEQLLINPDIKKLNQLIKKML 29
           FS+ F FF  +K  +AL    L++P   KL++++ KM+
Sbjct: 277 FSIYFLFFGEMKSLYALMHDFLVSPYSLKLSKMLAKMI 314


>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
            protein Y51A2D.7b protein.
          Length = 1057

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 190  ILDNHIPNSICIFRSTFSLQFPFFYIIKLQ 101
            I+ NH+P+S  +F   F L+F F  + K++
Sbjct: 1028 IIQNHLPDSAHLFPKIFPLEFEFLKLCKVE 1057


>AL021497-19|CAA16406.2|  989|Caenorhabditis elegans Hypothetical
            protein Y51A2D.7a protein.
          Length = 989

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 190  ILDNHIPNSICIFRSTFSLQFPFFYIIKLQ 101
            I+ NH+P+S  +F   F L+F F  + K++
Sbjct: 960  IIQNHLPDSAHLFPKIFPLEFEFLKLCKVE 989


>AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical
           protein Y50C1A.1 protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 307 DPCIKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEY-VNEAEKDSSEPELTR 471
           D CI R+  +C   + ++ +  Q MD+I N +  + K  +  N+  +  S   ++R
Sbjct: 471 DDCIARMNSTCVLASELLPTHHQYMDKIINEYMKSAKQRFQQNQRTQSDSRKRISR 526


>Z68337-2|CAA92746.2|  516|Caenorhabditis elegans Hypothetical
           protein M7.2 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 355 VIRSQKQLMDEISNGHEPAIKIEYVNEAEKDSSEPELTRDSV 480
           V+++ +Q +  + + HE A +I   N    DSSEP L  + +
Sbjct: 12  VLKTVQQTLFALRDEHEAATRILEANLINSDSSEPSLPSEKM 53


>Z81489-1|CAB04005.2|  266|Caenorhabditis elegans Hypothetical
           protein C55A1.1 protein.
          Length = 266

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = -2

Query: 280 LTGSTKKRSIWLTFRRKPLYVLAICVRTINILDNHIPNSICIFRSTFSLQFPFFYI 113
           L   T  RSI L   +K L+V  +   T+ ++  HIP ++      F++ F  F +
Sbjct: 190 LVDLTDLRSIRLRHLQKQLFVALVFQATVPLILMHIPVTVLYTCCVFNIVFDTFSV 245


>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23b protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 244 LTKCYAFSWIQLDSEDYNQICDPCIKRLRESCSF 345
           +T  + F    +DSE  N++C+  I  + +SC F
Sbjct: 440 ITSDFQFEMGNMDSETRNEVCNVLINVIFDSCLF 473


>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23a protein.
          Length = 1138

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 244 LTKCYAFSWIQLDSEDYNQICDPCIKRLRESCSF 345
           +T  + F    +DSE  N++C+  I  + +SC F
Sbjct: 440 ITSDFQFEMGNMDSETRNEVCNVLINVIFDSCLF 473


>AC084159-16|AAK39357.1|  205|Caenorhabditis elegans Hypothetical
           protein Y73B3A.7 protein.
          Length = 205

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 105 SLII*KNGN*SENVLRKMQMLFGIWLSKIFMVRTQMARTYRGLRRNVNQM 254
           SL++  N N + N   +MQM+    L +I MVR  +   YRG R+   Q+
Sbjct: 17  SLVL-HNNNDNNNNKNRMQMIMAPQLRRIQMVRKSI-MGYRGKRKTDQQL 64


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 316 IKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEYVNEAEKDSSEP 459
           I+ L E+  F N V+R     +       EP+I IE+V +    S  P
Sbjct: 152 IRYLSENLKFVNTVVRDVNNYIMSNRCECEPSIDIEFVQKLSSSSRNP 199


>AL110487-4|CAB54427.1|  505|Caenorhabditis elegans Hypothetical
           protein Y39E4B.5 protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 166 SICIFRSTFSLQFPFFYIIKLQFALCEQLLINPDI--KKLNQLIKKMLKHGL 17
           +I +FR   S+ F F +++   F LC   L  P+   K    +I +M+  GL
Sbjct: 421 TIPLFRIFGSMCFVFLFVVPSFFCLCYIYLFMPETLGKSTLDIIHEMIDRGL 472


>AF016430-3|AAB65369.1|  370|Caenorhabditis elegans Hypothetical
           protein C05C8.2 protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/64 (18%), Positives = 29/64 (45%)
 Frame = +1

Query: 295 NQICDPCIKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEYVNEAEKDSSEPELTRD 474
           NQI   C+K +    + + ++I+ +    DE+ + +  A    Y  + +  ++  E  + 
Sbjct: 208 NQIVTDCMKNIHPIYNIKTMMIKRELSKNDELKDANWDAYLPNYRKKVQSATTTKEAKKK 267

Query: 475 SVYE 486
             Y+
Sbjct: 268 KAYK 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,189,184
Number of Sequences: 27780
Number of extensions: 226323
Number of successful extensions: 700
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)