Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321E06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 177 4e-45
05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,364... 177 4e-45
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 0.74
05_05_0046 - 21834942-21835055,21835145-21835220,21835297-218355... 30 0.98
04_04_1328 - 32682087-32682200,32682290-32682365,32682442-326826... 30 0.98
04_03_0541 - 16934460-16934573,16934663-16934738,16934815-169350... 30 0.98
02_04_0664 + 24826714-24826842,24826912-24826947,24827551-248276... 30 0.98
01_06_1351 - 36510599-36510712,36510802-36510877,36510954-365112... 30 0.98
07_03_0521 + 19016824-19017000,19017064-19017099,19017860-190186... 29 1.7
05_06_0231 - 26587900-26587980,26588291-26588356,26588452-265885... 28 4.0
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 28 4.0
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 27 6.9
04_03_0313 + 14233049-14234362,14234558-14235523 27 6.9
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 27 9.1
08_01_0808 + 7828453-7829607 27 9.1
08_01_0040 - 287030-287569,287981-288196,288269-288535 27 9.1
08_01_0038 - 282431-283954 27 9.1
10_08_0982 - 22025279-22027277,22030256-22030488,22031205-220313... 24 9.7
>06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 177 bits (431), Expect = 4e-45
Identities = 75/115 (65%), Positives = 90/115 (78%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SCSLTAYKLTPSGYEWG N D G+NP GYLP+HYE+VQMLLSDRFLG++MVP WN+
Sbjct: 2237 SCSLTAYKLTPSGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNF 2296
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLF 176
NFMGV+HDP MKY ++LG PR+FYHE HRP HF+ F+ +++ DRED F
Sbjct: 2297 NFMGVKHDPLMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDE--GEVAEGDREDTF 2349
>05_01_0460 - 3644229-3644420,3644623-3644865,3644959-3645237,
3645328-3645525,3645614-3646249,3646352-3646606,
3646718-3646824,3646909-3650705,3650816-3651305,
3652043-3652433,3652621-3652713,3652818-3652941,
3653871-3654118
Length = 2350
Score = 177 bits (431), Expect = 4e-45
Identities = 75/115 (65%), Positives = 90/115 (78%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SCSLTAYKLTPSGYEWG N D G+NP GYLP+HYE+VQMLLSDRFLG++MVP WN+
Sbjct: 2237 SCSLTAYKLTPSGYEWGRSNKDSGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNF 2296
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLF 176
NFMGV+HDP MKY ++LG PR+FYHE HRP HF+ F+ +++ DRED F
Sbjct: 2297 NFMGVKHDPLMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDE--GEVAEGDREDTF 2349
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 NIK*NTMKNASRLNLCEQVFSVGGDCWRCSIFHSSKVHEMRRSVNLVVELARVAELHTV 304
N K NT+K+ N CE S+GG+ I + E RSV V+E V++ +
Sbjct: 4318 NGKSNTLKDQKENNTCEYTDSIGGEVNLLVIDENLVTFEEERSVLEVIESFSVSDAELI 4376
>05_05_0046 -
21834942-21835055,21835145-21835220,21835297-21835553,
21835643-21835741,21835820-21836018,21836102-21836315,
21836470-21836538,21836626-21836950,21837065-21837235,
21837315-21837479,21837555-21838191,21838258-21838319,
21838581-21838652,21839256-21839291,21839361-21839489
Length = 874
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 167
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 166 *PRSIFHCVSLYVVIEIKKKIN 101
P +F+ LYV KK++
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLS 750
>04_04_1328 -
32682087-32682200,32682290-32682365,32682442-32682698,
32682788-32682886,32682965-32683163,32683247-32683460,
32683615-32683683,32683772-32684096,32684211-32684381,
32684461-32684625,32684701-32684814,32685228-32685336,
32685403-32685464,32685726-32685797,32686401-32686436,
32686506-32686634
Length = 736
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 167
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 540 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 590
Query: 166 *PRSIFHCVSLYVVIEIKKKIN 101
P +F+ LYV KK++
Sbjct: 591 IPVHLFNHYVLYVFNMESKKLS 612
>04_03_0541 -
16934460-16934573,16934663-16934738,16934815-16935071,
16935161-16935259,16935338-16935536,16935620-16935833,
16935988-16936056,16936144-16936468,16936583-16936753,
16936833-16936997,16937073-16937709,16937776-16937837,
16938098-16938169,16938689-16938724,16938794-16938922
Length = 874
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 167
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 166 *PRSIFHCVSLYVVIEIKKKIN 101
P +F+ LYV KK++
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLS 750
>02_04_0664 +
24826714-24826842,24826912-24826947,24827551-24827622,
24827882-24827943,24828010-24828646,24828722-24828886,
24828966-24829136,24829251-24829575,24829663-24829731,
24829886-24830099,24830183-24830381,24830460-24830558,
24830648-24830904,24830981-24831056,24831146-24831259
Length = 874
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 167
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 166 *PRSIFHCVSLYVVIEIKKKIN 101
P +F+ LYV KK++
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLS 750
>01_06_1351 -
36510599-36510712,36510802-36510877,36510954-36511210,
36511300-36511398,36511477-36511675,36511759-36511972,
36512127-36512195,36512283-36512607,36512722-36512892,
36512972-36513136,36513212-36513848,36513915-36513976,
36514237-36514308,36514912-36514947,36515017-36515145
Length = 874
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA*I 167
N N++G RH N +G+ EF+ H+ AHF + P + D + +
Sbjct: 678 NTNYLGWRHFINQDFGMYALAGEEFWEASHQLAHF---------SGPEVVYDVSESHLIL 728
Query: 166 *PRSIFHCVSLYVVIEIKKKIN 101
P +F+ LYV KK++
Sbjct: 729 IPVHLFNHYVLYVFNMESKKLS 750
>07_03_0521 +
19016824-19017000,19017064-19017099,19017860-19018624,
19018772-19018864,19018944-19019114,19019206-19019397,
19019443-19019530,19019617-19019685,19019841-19020054,
19020136-19020334,19020406-19020504,19020594-19020850,
19020927-19021002,19021091-19021204
Length = 849
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 346 NYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHF 242
N N++G RH N +G+ EF+ H+ AHF
Sbjct: 653 NTNYLGWRHFINQDFGMYAVAGDEFWEASHQLAHF 687
>05_06_0231 -
26587900-26587980,26588291-26588356,26588452-26588597,
26589182-26589374,26589465-26589515,26590165-26590311,
26590365-26590463,26590557-26590760,26590839-26590887,
26590979-26591074,26591367-26591457,26591753-26591823,
26592170-26592222,26592740-26592828,26593322-26593517,
26593975-26594088,26594217-26594291
Length = 606
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 363 RPRAVGIITLWASVTTRI*STVCNS 289
+PR VGI+ W+S T +I S C+S
Sbjct: 397 KPRYVGIVERWSSKTLQIPSLSCSS 421
>01_05_0495 +
22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 244 FMNFAAMEDAAAPTIAADREDLFA*I*PRSIFHCVSLYV 128
F+ F A + P++ +++ L A I P+SIF C S+Y+
Sbjct: 502 FIQFIATHQSNGPSVK-NQDKLEATIQPQSIFDCFSIYL 539
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 212 CSIFHSSKVHEMRRSVNLVVELARVAELHTVLHIRVVTDAHKVII 346
C++ SSK+ + + +V E A++ E ++ +R+ T H ++I
Sbjct: 505 CTVSSSSKISNKKLQLLVVDEAAQLKECEGLIPLRLPTLKHAILI 549
>04_03_0313 + 14233049-14234362,14234558-14235523
Length = 759
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 218 IFHSSKVHEMRRSVNLVVELARVAELHTVLHIRVVTDAHKVIIPTALGRHHEI 376
I + +K+H +R +NL VE+ +L +L + + V +P ++G H +
Sbjct: 535 IQYLNKLHSLRLGINLKVEITWFNQLSNILFMS-LQGCKLVKLPESIGELHSL 586
>12_01_1080 +
11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -1
Query: 326 PSRPEYEV----RCATRQPSRVLPRGSQTGAFHE 237
P RPE +V CA S++LPR G+ HE
Sbjct: 262 PGRPECDVDDKSSCAVALCSKILPRSGNGGSDHE 295
>08_01_0808 + 7828453-7829607
Length = 384
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 185 FSVGGDCWRCSIFHSSKVHEMRRSVNLVVEL-ARVAELHTVLHIRVV 322
F VGG W +H+ + +++ +EL + AE+ T+ IR++
Sbjct: 57 FDVGGFDWCLRYYHNGNIESDDDYISVFLELMTKDAEVRTIFDIRML 103
>08_01_0040 - 287030-287569,287981-288196,288269-288535
Length = 340
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVR 323
PS++E + + +RFL M G+ N+NF+ R
Sbjct: 245 PSYWENAEEFMPERFLSNTMADYNGN-NFNFLPFR 278
>08_01_0038 - 282431-283954
Length = 507
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLGYFMVPSQGSWNYNFM----GVRHDPNMKYGV 296
PS++E + + +RFL M G+ N+NF+ G R P M + +
Sbjct: 410 PSYWENAEEFMPERFLSNTMAGYNGN-NFNFLPFGTGRRICPGMNFAI 456
>10_08_0982 -
22025279-22027277,22030256-22030488,22031205-22031344,
22032783-22032957
Length = 848
Score = 24.2 bits (50), Expect(2) = 9.7
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 347 PTALGRHHEIA 379
PTA+G HHEIA
Sbjct: 23 PTAVGPHHEIA 33
Score = 21.0 bits (42), Expect(2) = 9.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 362 RHHEIAQESI*EQHLHSLVMTRQVAFRIISSISIPH 469
RH E A E E++ H L R++++ + H
Sbjct: 43 RHEETAVEGTEEENEHELHYVYDTHTRLVNADILKH 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,350,505
Number of Sequences: 37544
Number of extensions: 271101
Number of successful extensions: 651
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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