Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321E06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 213 2e-55
AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific prote... 213 2e-55
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 213 2e-55
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 213 2e-55
U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated facto... 30 5.7
U57316-1|AAC50641.1| 476|Homo sapiens GCN5 protein. 30 5.7
BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of... 30 5.7
BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated fac... 30 5.7
BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated fac... 30 5.7
BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of... 30 5.7
BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of... 30 5.7
AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein. 30 5.7
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 213 bits (521), Expect = 2e-55
Identities = 91/116 (78%), Positives = 105/116 (90%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNY
Sbjct: 2222 SCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNY 2281
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 173
NFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2282 NFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific protein
variant protein.
Length = 398
Score = 213 bits (521), Expect = 2e-55
Identities = 91/116 (78%), Positives = 105/116 (90%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNY
Sbjct: 285 SCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNY 344
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 173
NFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 345 NFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 398
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 213 bits (521), Expect = 2e-55
Identities = 91/116 (78%), Positives = 105/116 (90%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNY
Sbjct: 2222 SCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNY 2281
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 173
NFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2282 NFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 213 bits (521), Expect = 2e-55
Identities = 91/116 (78%), Positives = 105/116 (90%)
Frame = -2
Query: 520 SCSLTAYKLTPSGYEWGVRNTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNY 341
SC+LTAYKLTPSGYEWG +NTD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNY
Sbjct: 2222 SCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNY 2281
Query: 340 NFMGVRHDPNMKYGVQLGNPREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 173
NFMGVRHDPNMKY +QL NP+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2282 NFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>U57316-1|AAC50641.1| 476|Homo sapiens GCN5 protein.
Length = 476
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 185 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 243
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 244 HNILYFLTYA 253
>BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 5.7
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein.
Length = 837
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 427 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 260
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 259 HRPAHFMNFA 230
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,626,729
Number of Sequences: 237096
Number of extensions: 1502542
Number of successful extensions: 3001
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2998
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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