Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321E02f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81592-10|CAB04732.1|  240|Caenorhabditis elegans Hypothetical p...    99   2e-21
AY731377-1|AAW63419.1|  240|Caenorhabditis elegans eukaryotic in...    99   2e-21
Z70683-6|CAA94591.2|  512|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z81592-10|CAB04732.1|  240|Caenorhabditis elegans Hypothetical
           protein T16G1.11 protein.
          Length = 240

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
 Frame = -3

Query: 477 PAYRFYMCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH--------------- 343
           P+  F + KCL+  + + ++ + +I  L  +LE C+FA FW  V                
Sbjct: 77  PSSDFALAKCLIDTNRLGSQELRRIFDLGAVLESCNFAVFWKLVKGAYKPTTNPNEPFKV 136

Query: 342 --QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW- 172
             ++P++   + GF D+++ + C V+ +TFQ I+K  L+ LLGG  D  +    + +GW 
Sbjct: 137 PGEVPKMIKPMVGFEDAVKHYACRVISVTFQKIEKKMLSRLLGGASDKEVTALAQSFGWE 196

Query: 171 -RDDGSLIFIANQDENIKTKNITEKIEFDHLAPLMAPL 61
            +++G + F+AN +  IKT+NI EKI+F H+A L+  +
Sbjct: 197 AKENGDVFFVANHEGTIKTRNIDEKIQFPHVADLLTSI 234


>AY731377-1|AAW63419.1|  240|Caenorhabditis elegans eukaryotic
           initiation factor eIF-3.K protein.
          Length = 240

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 19/158 (12%)
 Frame = -3

Query: 477 PAYRFYMCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH--------------- 343
           P+  F + KCL+  + + ++ + +I  L  +LE C+FA FW  V                
Sbjct: 77  PSSDFALAKCLIDTNRLGSQELRRIFDLGAVLESCNFAVFWKLVKGAYKPTTNPNEPFKV 136

Query: 342 --QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGW- 172
             ++P++   + GF D+++ + C V+ +TFQ I+K  L+ LLGG  D  +    + +GW 
Sbjct: 137 PGEVPKMIKPMVGFEDAVKHYACRVISVTFQKIEKKMLSRLLGGASDKEVTALAQSFGWE 196

Query: 171 -RDDGSLIFIANQDENIKTKNITEKIEFDHLAPLMAPL 61
            +++G + F+AN +  IKT+NI EKI+F H+A L+  +
Sbjct: 197 AKENGDVFFVANHEGTIKTRNIDEKIQFPHVADLLTSI 234


>Z70683-6|CAA94591.2|  512|Caenorhabditis elegans Hypothetical
           protein F13B12.2 protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = -3

Query: 444 LLESVVENETISQIKYLADILEQCD---FAQFWNRVHQMPELCSRISGF-HDSIRK 289
           LL+     E I  IK+  DI +  +     ++W+ V +MPE  S  S F + SIR+
Sbjct: 233 LLQMGRYTEAIESIKFYYDIEDSDEDEIIKEYWDMVPEMPEQLSLCSAFSNSSIRR 288


>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
           protein C45G3.1 protein.
          Length = 1186

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 179 YFLTQCFNVTSSIPPNRFARLFLSIV*NVIPTT*QTNFLIE 301
           YF+ Q     SSIP NR    F + V   +P T + N L E
Sbjct: 581 YFIVQQLLADSSIPRNRSVSPFSNNVTFTVPRTPRNNILTE 621


>Z81114-2|CAB03286.1|  604|Caenorhabditis elegans Hypothetical
           protein T04D3.2 protein.
          Length = 604

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
 Frame = -3

Query: 507 MSDL*KLY*FPAYRFYMCKCLLLE--SVVENETISQIKYLA-DILEQCDFAQFWNRVHQM 337
           + DL  L   P ++  +C+    E   V+ +   + IKY+  D     DF Q  ++    
Sbjct: 279 VDDLNYLDSLPTFKVRICQASQKEVVCVINSCNGNYIKYIYNDHTGNFDFYQGTSKFEVT 338

Query: 336 PE-LCSRISGFHDSIRKFVCHVVGITFQTIDK 244
            + L ++ S FH  ++K+V HV  +    ++K
Sbjct: 339 EDSLVAKYSEFHQGLKKYVFHVHNLESNLMEK 370


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 164 SSLHPYFLTQCFNVTSSIPPNRF 232
           S++H YF   C N T+  PPN F
Sbjct: 64  STMHTYFSFLCTNSTNISPPNVF 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,311,784
Number of Sequences: 27780
Number of extensions: 258868
Number of successful extensions: 582
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)