Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321D12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 205 4e-54
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 102 4e-23
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 99 5e-22
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 86 3e-18
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 85 5e-18
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 83 2e-17
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 74 1e-14
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 70 2e-13
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 69 6e-13
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 69 6e-13
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 62 5e-11
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 55 7e-09
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 50 2e-07
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.020
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.18
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 28 0.97
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 28 0.97
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 27 2.2
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 6.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 9.0
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 9.0
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 25 9.0
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 9.0
SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase Byr1|Schizosacchar... 25 9.0
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 25 9.0
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 25 9.0
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 205 bits (500), Expect = 4e-54
Identities = 86/124 (69%), Positives = 102/124 (82%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MS + RL EERK WR+DHPFGF A+P K+ DG L+LM W+ IPGK T WEGGLYKL
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKL 60
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
M F ++YP+ PPKC+F PPLFHPNVYPSGTVCLS+L+EE+ W+PAITIKQILLGIQDLL
Sbjct: 61 TMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLL 120
Query: 508 NEPN 519
++PN
Sbjct: 121 DDPN 124
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 102 bits (244), Expect = 4e-23
Identities = 54/132 (40%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Frame = +1
Query: 157 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 336
+A RL +E K ++ P G A P D TW+C I G GTP+EGGLY +
Sbjct: 5 MALRRLMKEYKELTENGPDGITAGPSNEDD----FFTWDCLIQGPDGTPFEGGLYPATLK 60
Query: 337 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITIKQI 483
F DYP PP KFE FHPNVY GTVC+S+L D W P ++++I
Sbjct: 61 FPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKI 120
Query: 484 LLGIQDLLNEPN 519
LL + +L EPN
Sbjct: 121 LLSVMSMLAEPN 132
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 98.7 bits (235), Expect = 5e-22
Identities = 50/124 (40%), Positives = 68/124 (54%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MS A RL + K ++D P G A P+ + N+M W I G TP+E G +KL
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSD-----NVMLWNAVIIGPADTPFEDGTFKL 55
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
+ F + YP+ PP KF +FHPNVY +G +CL +L + W P + IL IQ LL
Sbjct: 56 VLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL--QNRWSPTYDVAAILTSIQSLL 113
Query: 508 NEPN 519
N+PN
Sbjct: 114 NDPN 117
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 86.2 bits (204), Expect = 3e-18
Identities = 43/117 (36%), Positives = 67/117 (57%)
Frame = +1
Query: 169 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 348
R+ +E + +D P G VA P ++ NL ++ + G + + +EGG + L + D+
Sbjct: 6 RIIKEIETLTRDPPPGIVAAPTED-----NLRYFKITMEGPQQSAYEGGKFHLELFLPDE 60
Query: 349 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 519
YP PP +F ++HPNV G +CLS L +KDW PA+ I+ +LL IQ L+ PN
Sbjct: 61 YPMMPPNVRFLTKIYHPNVDKLGRICLSTL--KKDWSPALQIRTVLLSIQALMGAPN 115
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 85.4 bits (202), Expect = 5e-18
Identities = 43/121 (35%), Positives = 67/121 (55%)
Frame = +1
Query: 157 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 336
+A R+ E KD P A P+ + +L W+ I G +P+ GG++ L +
Sbjct: 1 MALKRINRELADLGKDPPSSCSAGPVGD-----DLFHWQATIMGPADSPYAGGVFFLSIH 55
Query: 337 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 516
F DYP PPK F ++HPN+ +G++CL +L ++ W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSLLTDP 113
Query: 517 N 519
N
Sbjct: 114 N 114
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 83.0 bits (196), Expect = 2e-17
Identities = 39/93 (41%), Positives = 53/93 (56%)
Frame = +1
Query: 241 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGT 420
PD NL+ W I G T +EG +K+ M F +YP SPP F P++HPNV SG
Sbjct: 52 PDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGN 111
Query: 421 VCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 519
+CL +L ++ W ++ ILL +Q LL EPN
Sbjct: 112 ICLDILKDK--WSAVYNVQTILLSLQSLLGEPN 142
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 74.1 bits (174), Expect = 1e-14
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Frame = +1
Query: 151 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 330
S + L ++ K +K+ P GF + + ++ WE I G + T +EGG +
Sbjct: 3 SSASEQLLRKQLKEIQKNPPQGFSVGLVDDK----SIFEWEVMIIGPEDTLYEGGFFHAT 58
Query: 331 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLL-----------DEEKDWRPAITIK 477
+ F DYP PPK KF ++HPNV+P+G VC+S+L D + W P + +
Sbjct: 59 LSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPE 118
Query: 478 QILLGIQDLLNEPN 519
IL+ + +L+ PN
Sbjct: 119 TILISVISMLSSPN 132
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 69.7 bits (163), Expect = 2e-13
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MS S R+A+E ++D G + + L M G +GTP+EGG + +
Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDDISHLKGM-----FRGPEGTPYEGGYFVV 55
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 504
+ DYP PPK F+ ++HPNV +G +CL +L ++ W P T+K L+ +Q L
Sbjct: 56 DIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ--WSPVYTMKSALISLQSL 113
Query: 505 LNEP 516
L P
Sbjct: 114 LCTP 117
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 68.5 bits (160), Expect = 6e-13
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +1
Query: 304 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQI 483
++GG +K R+ D+YP PPK K ++HPN+ G VCL++L +DW P + + I
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNIL--RQDWNPVLNLNSI 122
Query: 484 LLGIQDLLNEPN 519
L+G+Q L PN
Sbjct: 123 LVGLQFLFLSPN 134
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 68.5 bits (160), Expect = 6e-13
Identities = 31/88 (35%), Positives = 49/88 (55%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W C G + + GG + + F DYP PP +F ++HPN G VCL++
Sbjct: 35 NLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAI 94
Query: 436 LDEEKDWRPAITIKQILLGIQDLLNEPN 519
L +++ ++P+I ++ +L I LL EPN
Sbjct: 95 L-KQQVFKPSIKLRSVLEQILQLLREPN 121
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 62.1 bits (144), Expect = 5e-11
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 241 PDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSG 417
P +++ W+ I G TP+EGG + L + + YP SPP F+ + HPN+ + +G
Sbjct: 28 PVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNG 87
Query: 418 TVCLSLLDEEKDWRPAITIKQILLGIQDLLN 510
VC+ +L + W PA +++ L I LL+
Sbjct: 88 EVCMDIL--KTHWSPAWSLQSACLAIISLLS 116
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 54.8 bits (126), Expect = 7e-09
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
N++ W I G TP+EGG Y +IF DYP PP + P + +CLS
Sbjct: 33 NILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSF 90
Query: 436 LD-EEKDWRPAITIKQILLGI 495
D K W P+ + IL+G+
Sbjct: 91 SDFHPKSWNPSWMVSTILVGL 111
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 50.4 bits (115), Expect = 2e-07
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLS 432
N+ + G TP+ GG++K+ + +YP P F +FHPN+ SG+VCL
Sbjct: 28 NMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLD 87
Query: 433 LLDEEKDWRPAITIKQIL-LGIQDLLNEPN 519
++++ W P + I + + LL PN
Sbjct: 88 VINQ--TWSPMFDMINIFEVFLPQLLRYPN 115
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.020
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 169 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 348
+L EE + K + + N D + L W I G + E +Y L++ +
Sbjct: 9 KLLEELEKGEKGLGESSCSYGLTNAD-DITLSDWNATILGPAHSVHENRIYSLKIHCDAN 67
Query: 349 YPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQ 498
YP +PP F + P V +G V +D + W+ +++ +LL ++
Sbjct: 68 YPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLK 118
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.3 bits (65), Expect = 0.18
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -1
Query: 377 NLHFGGLDG*SSLKIIRSLYSPPSHGVPFLPGIAHSQVI-KFNEPS---GFFIGLATK 216
N F G+ L + S SP HG P +PG+ H+ + + EPS F GL +K
Sbjct: 442 NPQFSGVLNLPGLGTMPSFPSPYQHGQPQIPGMLHASLSNSYAEPSTQNSFIPGLTSK 499
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.97
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 319 TAHLPMESPFYQVSHIPKSLNSMNHLDSS*ASRQNQRDGPYAKLSVLQLN 170
T+ +P PFY S +SLN+ H + + PYAKLS N
Sbjct: 613 TSPIPAR-PFYAQSGSLQSLNTTQHSHQISGGHSGRMNVPYAKLSYTSHN 661
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 206 WSLRQAFRSSAKRALAIPDIFYKNNSIYEPSFNQGL 99
W LR+ +S++ + ++F K NSIY +F++ L
Sbjct: 71 WQLREQEQSNSHISRNENELFSKENSIYNGNFSENL 106
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 208 PFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYK 324
P V+R + L+ TW C++ G+ G +G L+K
Sbjct: 123 PSKVVSRKHAVVEYDLDDQTWNCSVYGRNGIKVDGKLFK 161
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 464 AGRQSFSSSSSDKHTVPDGYTLGWNSGGSNL 372
A +QS+ + SSD ++P L +NS G +
Sbjct: 249 ASQQSYINHSSDGASLPQSSFLNFNSSGKRV 279
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +2
Query: 368 NANLNHHCSTPMCIHQVRCACHCLMKKKIG 457
N+N ++ CIH V CH +K G
Sbjct: 87 NSNFDNRVGVIECIHLVNFMCHDSLKINFG 116
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 251 EPSGFFIGLATKPKGWSLRQAFRSSAKRALA 159
E SGF + L ++ + WSL + S LA
Sbjct: 773 EDSGFSLKLCSEVQEWSLNKVLNGSINEKLA 803
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 394 HPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNE 513
H N++P L +D D +P T+ Q L IQ + E
Sbjct: 161 HTNIHPEAPTVLPPIDGFTDSQPISTLPQDLSQIQLRIQE 200
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 148 FSTKITRFMSRASIKGYS*CWTID 77
FS +ITRF R + CWT D
Sbjct: 343 FSAEITRFADRNFYDDWWNCWTWD 366
>SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase
Byr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 326 YV*SSKMIIHQVLQNANLNHHCSTPMCI 409
YV S + Q+L+ + HHC +P +
Sbjct: 96 YVGSDSKLQKQILRELGVLHHCRSPYIV 123
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 287 VKRGLHGKVGCINYV*SS 340
++ G HGK G +NYV SS
Sbjct: 537 LETGWHGKFGSLNYVTSS 554
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 316 LYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGI 495
L KL IF ++ + KF HPN T ++ + + KQIL +
Sbjct: 464 LRKLTEIFGLEWATETIIPKFLAMRSHPNYLYRMTTIFAISEIAPALNAEVIEKQILPTL 523
Query: 496 QDLLNEP 516
+ L+N+P
Sbjct: 524 EQLVNDP 530
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,259,351
Number of Sequences: 5004
Number of extensions: 50391
Number of successful extensions: 135
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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