Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321D12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 239 9e-64
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 239 9e-64
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 98 4e-21
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 98 4e-21
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 91 6e-19
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 89 1e-18
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 83 9e-17
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 83 9e-17
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 80 8e-16
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 77 8e-15
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 73 9e-14
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 73 1e-13
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 68 5e-12
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 62 2e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 61 4e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 7e-10
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 57 7e-09
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 57 9e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 51 4e-07
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 50 8e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 50 1e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.002
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical p... 27 8.1
Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 27 8.1
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 239 bits (585), Expect = 9e-64
Identities = 99/124 (79%), Positives = 115/124 (92%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 508 NEPN 519
N PN
Sbjct: 121 NHPN 124
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 239 bits (585), Expect = 9e-64
Identities = 99/124 (79%), Positives = 115/124 (92%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 508 NEPN 519
N PN
Sbjct: 121 NHPN 124
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 97.9 bits (233), Expect = 4e-21
Identities = 47/117 (40%), Positives = 68/117 (58%)
Frame = +1
Query: 169 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 348
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 349 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 519
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPN 117
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 97.9 bits (233), Expect = 4e-21
Identities = 47/117 (40%), Positives = 68/117 (58%)
Frame = +1
Query: 169 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 348
RL + K ++D P G P ++ N++TWE I G + TP+E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 349 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 519
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPN 117
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 90.6 bits (215), Expect = 6e-19
Identities = 50/135 (37%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
M+G A RL E K P G +A P+ N WEC I G + T + G++
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDED----NFFEWECLITGPEETCFANGVFPA 56
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITI 474
R+ F DYP SPPK +F +FHPN+Y G VC+S+L D W P +I
Sbjct: 57 RITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSI 116
Query: 475 KQILLGIQDLLNEPN 519
++ILL + +L EPN
Sbjct: 117 EKILLSVVSMLAEPN 131
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 89.4 bits (212), Expect = 1e-18
Identities = 42/114 (36%), Positives = 70/114 (61%)
Frame = +1
Query: 178 EERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPS 357
EE+ W + P G+ A+P+ +G+ +W C +PG +G+PWEGG Y++ + F +P
Sbjct: 42 EEKAKWDERTPQGYTAKPISF-EGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPI 99
Query: 358 SPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPN 519
PP C+F+ PL HPNV G++ L +L++E W ++K++L I +LL P+
Sbjct: 100 IPPICEFKTPLHHPNVDLRGSIYLKMLEQE-HWSSETSLKKLLREISNLLATPD 152
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 83.4 bits (197), Expect = 9e-17
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = +1
Query: 157 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 336
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 337 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 516
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 517 N 519
N
Sbjct: 114 N 114
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 83.4 bits (197), Expect = 9e-17
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = +1
Query: 157 IASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMI 336
+A R+ +E + +D P A P+ + +L W+ I G +P++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 337 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 516
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 517 N 519
N
Sbjct: 114 N 114
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 80.2 bits (189), Expect = 8e-16
Identities = 43/124 (34%), Positives = 68/124 (54%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
M+G R+ +E + D G A NPD S N + I G +P+ GG++KL
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISA----NPDES-NARYFHVMIAGPDDSPFAGGVFKL 55
Query: 328 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 507
+ ++YP + PK +F ++HPN+ G +CL +L ++ W PA+ I+ +LL IQ LL
Sbjct: 56 ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALL 113
Query: 508 NEPN 519
+ PN
Sbjct: 114 SAPN 117
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 77.0 bits (181), Expect = 8e-15
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 436 LDEEKD-----------WRPAITIKQILLGIQDLLNEPN 519
L D W P +++ ILL + LLNEPN
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPN 136
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 73.3 bits (172), Expect = 9e-14
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 NLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 432
NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLNEP 516
++ E +W+PA +Q+++ + L+NEP
Sbjct: 89 IVTAE-NWKPATKTEQVMMALLSLINEP 115
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 72.9 bits (171), Expect = 1e-13
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 436 LDE-----------EKDWRPAITIKQILLGIQDLLNEPN 519
L + E+ W P T++ ILL + +L +PN
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPN 130
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 70.9 bits (166), Expect = 5e-13
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Frame = +1
Query: 148 MSGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKL 327
MS A+ RL +E + + P G + + N S +L W+ + G +GT + G ++ L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLL---VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFML 57
Query: 328 RMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQD 501
+ F YP + P+ F E HP++Y +G +CLS+L + DW PA++++ + L I
Sbjct: 58 QFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSD--DWTPALSVQSVCLSILS 115
Query: 502 LLN 510
+L+
Sbjct: 116 MLS 118
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 67.7 bits (158), Expect = 5e-12
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 432
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 433 LLDEEKDWRPAITIKQILLGIQDLLNEP 516
+L ++ W ++T++ +LL IQ L+ P
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQALMCTP 120
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 441
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 442 ----EEKDWRPAITIKQILLGIQDLLNE 513
E+ W P ++ Q+L+ IQ+++ +
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVIEK 536
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 61.3 bits (142), Expect = 4e-10
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +1
Query: 151 SGIASARLAEERKAWRK--DHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLY 321
SG+++ L +K +++ P F+ A P++ N++ W I G TP+EGG+Y
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPLET-----NILEWRYIIIGAPKTPYEGGIY 57
Query: 322 KLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-WRPAITIKQILLGIQ 498
+++F D+P PP P + + +CLS+ D D W PA T+ I+ G+
Sbjct: 58 MGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLM 115
Query: 499 DLLNE 513
+N+
Sbjct: 116 SFMND 120
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 7e-10
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 151 SGIASARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLR 330
S A RL ++ +D G A P N D N++ W + G TP+ GG Y +
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP--NED---NILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 331 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGIQDLL 507
+IFK+++P SPP P + + +CLS+ D + W P T+ IL+G+ +
Sbjct: 72 VIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM 129
Query: 508 NE 513
NE
Sbjct: 130 NE 131
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 57.2 bits (132), Expect = 7e-09
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 16/103 (15%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 390
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 391 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 516
+HPN+ +GT+CL +L ++ W ++T++ +LL +Q +L P
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAMLCSP 149
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 456
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 457 RPAITIKQILLGIQDLLNEPN 519
++TI ++L+ IQ ++ N
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFN 464
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 51.2 bits (117), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 295 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 471
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 472 IKQILLGIQDLLNEPN 519
++ +LL + LLNEP+
Sbjct: 113 MEDVLLNLIVLLNEPD 128
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 50.4 bits (115), Expect = 8e-07
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 435
NL W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 37 NLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
Query: 436 LD-EEKDWRPAITIKQILLGI 495
+ W P+ +I+ LL +
Sbjct: 95 SGYHPETWLPSWSIRTALLAL 115
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 49.6 bits (113), Expect = 1e-06
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 286 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 462
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++ W
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQA--WTA 98
Query: 463 AITIKQIL-LGIQDLLNEPN 519
+ I + LL PN
Sbjct: 99 LYDLTNIFDTFLPQLLTYPN 118
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +1
Query: 304 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 471
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 472 IKQILLGIQDLLNE 513
+ ++ G+ L N+
Sbjct: 132 LTDVVHGLVSLFND 145
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 45.2 bits (102), Expect = 3e-05
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +1
Query: 169 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDD 348
RL EE + +K G ++ +++ D + L W +I G TP+E +Y L++ +
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLED-DSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGN 67
Query: 349 YPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDEEKDWRPAITIKQILLGIQ 498
YP PP +F + V S G + L ++W + IK +L I+
Sbjct: 68 YPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIR 118
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +1
Query: 280 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 414
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 262 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 363
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>Z70284-20|CAA94286.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 338 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 469
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>Z70271-8|CAA94238.2| 543|Caenorhabditis elegans Hypothetical
protein W08D2.8 protein.
Length = 543
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 338 SKMIIHQVLQNANLNHHCSTPMCIHQVRCACHCLMKKKIGVQQS 469
SK II ++ A+ H S+ IH+ A +CL+ K++ V+ S
Sbjct: 275 SKQIIKFAMEIASGMKHLSSKNVIHRDLAARNCLITKELNVKIS 318
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 262 MTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSP 363
+TW+ IPGK T W+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,363,618
Number of Sequences: 27780
Number of extensions: 287190
Number of successful extensions: 724
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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