Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321D09f
(416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 32 0.67
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 32 0.67
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 32 0.67
D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein. 30 3.6
BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein. 30 3.6
BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein. 30 3.6
AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associate... 30 3.6
AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense... 30 3.6
AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsens... 30 3.6
AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense... 30 3.6
AL137800-2|CAI19477.1| 757|Homo sapiens Smg-7 homolog, nonsense... 30 3.6
AK091477-1|BAC03672.1| 757|Homo sapiens protein ( Homo sapiens ... 30 3.6
AK056035-1|BAB71079.1| 799|Homo sapiens protein ( Homo sapiens ... 30 3.6
AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript varian... 30 3.6
AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein. 30 3.6
X14439-1|CAA32612.1| 177|Homo sapiens amelogenin protein. 29 8.2
M86933-1|AAA51718.1| 192|Homo sapiens amelogenin protein. 29 8.2
M55419-1|AAA62827.1| 177|Homo sapiens amelogenin protein. 29 8.2
BC074977-1|AAH74977.1| 192|Homo sapiens amelogenin (Y chromosom... 29 8.2
BC074976-1|AAH74976.1| 192|Homo sapiens amelogenin, Y-linked pr... 29 8.2
BC069138-1|AAH69138.1| 192|Homo sapiens amelogenin, Y-linked pr... 29 8.2
AY487421-1|AAR39431.1| 206|Homo sapiens amelogenin precursor pr... 29 8.2
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 32.3 bits (70), Expect = 0.67
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +3
Query: 30 KRSSGSQR*HSCTKQ-----ASSTSRSQKDFNHYNDSHQCSIV*RQHRRNLWRSRGNYSH 194
KR+SG R S +K + S SRS K Y+ S S R + R+ RSR
Sbjct: 699 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCS-RSYSRSRSRSRSRSRS 757
Query: 195 PRKDPRSWTSRPSTGFSPSRPKA*LEA*P*TPS 293
R RS + S +SP R + P PS
Sbjct: 758 SRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPS 790
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 32.3 bits (70), Expect = 0.67
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +3
Query: 30 KRSSGSQR*HSCTKQ-----ASSTSRSQKDFNHYNDSHQCSIV*RQHRRNLWRSRGNYSH 194
KR+SG R S +K + S SRS K Y+ S S R + R+ RSR
Sbjct: 699 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCS-RSYSRSRSRSRSRSRS 757
Query: 195 PRKDPRSWTSRPSTGFSPSRPKA*LEA*P*TPS 293
R RS + S +SP R + P PS
Sbjct: 758 SRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPS 790
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.67
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +3
Query: 30 KRSSGSQR*HSCTKQ-----ASSTSRSQKDFNHYNDSHQCSIV*RQHRRNLWRSRGNYSH 194
KR+SG R S +K + S SRS K Y+ S S R + R+ RSR
Sbjct: 214 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCS-RSYSRSRSRSRSRSRS 272
Query: 195 PRKDPRSWTSRPSTGFSPSRPKA*LEA*P*TPS 293
R RS + S +SP R + P PS
Sbjct: 273 SRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPS 305
>D87437-1|BAA13381.2| 1122|Homo sapiens KIAA0250 protein.
Length = 1122
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 713 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 747
>BC052565-1|AAH52565.1| 839|Homo sapiens SMG7 protein protein.
Length = 839
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 430 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 464
>BC036381-1|AAH36381.1| 1178|Homo sapiens SMG7 protein protein.
Length = 1178
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 682 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 716
>AY386363-1|AAR25620.1| 802|Homo sapiens breast cancer-associated
antigen SGA-56M protein.
Length = 802
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 393 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 427
>AL449223-4|CAI16627.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 728 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 762
>AL137800-13|CAI19486.1| 1137|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1137
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 728 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 762
>AL137800-3|CAI19478.1| 1099|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 1099
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 640 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 674
>AL137800-2|CAI19477.1| 757|Homo sapiens Smg-7 homolog, nonsense
mediated mRNA decay factor (C. elegans) protein.
Length = 757
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 640 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 674
>AK091477-1|BAC03672.1| 757|Homo sapiens protein ( Homo sapiens
cDNA FLJ34158 fis, clone FCBBF3013589, weakly similar to
GLUTENIN, LOW MOLECULAR WEIGHT SUBUNIT PRECURSOR. ).
Length = 757
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 640 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 674
>AK056035-1|BAB71079.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ31473 fis, clone NT2NE2001530. ).
Length = 799
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 682 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 716
>AB085674-2|BAC53622.1| 1071|Homo sapiens SMG-7 transcript variant 2
protein.
Length = 1071
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 662 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 696
>AB085674-1|BAC53621.1| 1137|Homo sapiens SMG-7 protein.
Length = 1137
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 89 PVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQ 199
P+++G P Q QPP Q L + PAQP +S L Q
Sbjct: 728 PMNQG--PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQ 762
>X14439-1|CAA32612.1| 177|Homo sapiens amelogenin protein.
Length = 177
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 99 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 149
>M86933-1|AAA51718.1| 192|Homo sapiens amelogenin protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 117 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
>M55419-1|AAA62827.1| 177|Homo sapiens amelogenin protein.
Length = 177
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 99 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 149
>BC074977-1|AAH74977.1| 192|Homo sapiens amelogenin (Y chromosome),
precursor protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 117 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
>BC074976-1|AAH74976.1| 192|Homo sapiens amelogenin, Y-linked
protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 117 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
>BC069138-1|AAH69138.1| 192|Homo sapiens amelogenin, Y-linked
protein.
Length = 192
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 117 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
>AY487421-1|AAR39431.1| 206|Homo sapiens amelogenin precursor
protein.
Length = 206
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 44 KPTLTLLHQAGLVYVPVS-EGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLP 193
+P L L Q PV + QP+Q QPPVQ P PL + L P
Sbjct: 131 QPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.283 0.103 0.254
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,419,019
Number of Sequences: 237096
Number of extensions: 724936
Number of successful extensions: 718
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 18 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 45 (21.6 bits)
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