Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321D09f
         (416 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068708-9|AAC17756.1|  198|Caenorhabditis elegans Erythroid-lik...    26   9.5  
AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical...    26   9.5  

>AF068708-9|AAC17756.1|  198|Caenorhabditis elegans Erythroid-like
           transcription factorfamily protein 7, isoform a protein.
          Length = 198

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 110 PLQRQPPVQHRLKTTPAQPLEKS 178
           P   + P+Q  + TTP QPLE S
Sbjct: 72  PSPYEQPIQSSMCTTPLQPLEDS 94


>AC024805-16|AAK39336.1|  448|Caenorhabditis elegans Hypothetical
           protein Y51H7C.1 protein.
          Length = 448

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = +2

Query: 80  VYVPVSEGLQPLQRQPPVQHRLKTTPAQPLEKSWKLLPPQEGP 208
           VY P     QP +  P    R   T    + + W  LPP   P
Sbjct: 232 VYTPAPPATQPPRTYPTTTPRPIPTTKTTVPQQWTTLPPGPEP 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.283    0.103    0.254 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,510,130
Number of Sequences: 27780
Number of extensions: 110628
Number of successful extensions: 78
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 18 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 45 (21.6 bits)