Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321D04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   3.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 197 KRNYQQIKEGREAQTWAQEWK 135
           K+   +I EG+E++T   +W+
Sbjct: 213 KKKEDEIDEGKESKTKLSQWR 233


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = -2

Query: 391 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNA--PMIQVNDDYYE 218
           T P W  G  A L  I  +TN   GG+     +        GAC +A     +++ D  +
Sbjct: 82  TVPRWRNGIPATLTYISLDTN--RGGSPKLTPYPNWAQNKAGACGSAITTAYRIHADSCD 139

Query: 217 DLSVEDTKEI 188
            L V DT  I
Sbjct: 140 RLWVLDTGTI 149


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 252 AFTQAPKHSTSETENLPQGLLPPTSQFVSCLI 347
           AFTQA    T E ++LP G       F  C++
Sbjct: 186 AFTQASLAMTREEKHLPIGASVLFEIFPFCIV 217


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 358 ILNAIKQETNCEVGG 314
           +LN   +  NCE+GG
Sbjct: 869 VLNGETRTINCEIGG 883


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,416
Number of Sequences: 438
Number of extensions: 3317
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)