Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321D02f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    23   6.2  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    23   6.2  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 377 TRNAKCGRIFASKPHIAVSHIKTDRAS 457
           T  A C ++FA++P +A+  +    AS
Sbjct: 74  TSLAPCSKLFAAEPRVALPKLSATGAS 100


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 263 ESQLDSMPPEDSASLAPCLIWKNLPQTSNALWD 361
           E +L ++ PE +  L+  L W+N  +     WD
Sbjct: 24  EFELYNVRPETAEQLSVLLKWRNGQEIEVDFWD 56


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 263 ESQLDSMPPEDSASLAPCLIWKNLPQTSNALWD 361
           E +L ++ PE +  L+  L W+N  +     WD
Sbjct: 24  EFELYNVRPETAEQLSVLLKWRNGQEIEVDFWD 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,332
Number of Sequences: 2352
Number of extensions: 13329
Number of successful extensions: 222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)