Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321D01f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0054 - 16038103-16038251,16038256-16038619                       29   1.7  
11_01_0474 - 3666236-3668050                                           27   6.9  
08_02_1529 + 27668348-27669079                                         27   6.9  
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285...    27   9.1  
03_06_0292 - 32886148-32886354,32886997-32887154,32887265-328873...    27   9.1  
02_04_0136 + 20128505-20128823,20130177-20130408,20130520-201307...    27   9.1  

>06_03_0054 - 16038103-16038251,16038256-16038619
          Length = 170

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 194 KQLLKEAVAIPSVSCDVKYRADCIRMV-HWMQDKLKEVGATTELRDVGFQTID 349
           K +L     +P+    VK   +C   + HW+Q+K K+ G  T    +G Q  D
Sbjct: 11  KDILDNKRPLPTTKV-VKLTEECSNAILHWLQEKKKDPGCPTITCSIGRQHFD 62


>11_01_0474 - 3666236-3668050
          Length = 604

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
 Frame = +2

Query: 77  FPAYHQHYSVSSKQVSAKM-ATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYR 253
           F  Y   Y V  K     +  T KTLP +F Y +Q+    + +  E       SC     
Sbjct: 411 FLVYDHDYCVKEKFWKIMLDTTNKTLPSVFAYKNQSSPCLRCIPSEISGYLLTSCS---- 466

Query: 254 ADCIRMVHWMQDKLKEVGATT 316
           +D  +    + D L    ATT
Sbjct: 467 SDSTKPAAIVVDVLPAAAATT 487


>08_02_1529 + 27668348-27669079
          Length = 243

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 488 VQKVQSPIHQISKQVVHPNDHRYKL 414
           +  V+S +H + KQ+V PN  R+ L
Sbjct: 168 ISMVESSLHLLLKQIVKPNSSRWSL 192


>05_05_0237 -
           23526613-23527178,23527979-23528066,23528384-23528527,
           23528674-23528790,23528860-23528970,23530911-23531062,
           23531362-23531450,23531664-23531761
          Length = 454

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +2

Query: 119 VSAKMA-TEKTLPEIFKYVDQNKDSYK-QLLKEAVAIPSVSCDVKYRADC 262
           + A++A  ++ L E+ K VD+++D YK Q L+E   + S   +     DC
Sbjct: 219 IDARLAKAQEILEELLKPVDESQDYYKRQQLRELALLNSPLREESPHPDC 268


>03_06_0292 -
           32886148-32886354,32886997-32887154,32887265-32887378,
           32887660-32887924
          Length = 247

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 347 LLFESQHPLTL*WLRLPSICLASSEPYGC 261
           + F ++HP+ L +L L ++C++ S   GC
Sbjct: 94  IYFRNKHPINLFFLLLFTVCISFSVGLGC 122


>02_04_0136 +
           20128505-20128823,20130177-20130408,20130520-20130713,
           20130798-20130931,20131050-20131619
          Length = 482

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 260 CIRMVHWMQDKLKEVGATTELRDV 331
           C+R  H+++D+LKE G    L ++
Sbjct: 378 CLRNAHYLKDRLKEAGIGAMLNEL 401


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,988,535
Number of Sequences: 37544
Number of extensions: 271800
Number of successful extensions: 646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)