Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321D01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...   118   5e-27
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...   118   5e-27
AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p pro...    28   8.8  
AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA...    28   8.8  

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score =  118 bits (284), Expect = 5e-27
 Identities = 60/125 (48%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
 Frame = +2

Query: 149 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 328
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA TEL D
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67

Query: 329 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE 505
           VG QT+ +G+ +            DP K TV +YGHLDVQPALK DGW T PFEL E + 
Sbjct: 68  VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127

Query: 506 KLYGR 520
           KL+GR
Sbjct: 128 KLFGR 132


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score =  118 bits (284), Expect = 5e-27
 Identities = 60/125 (48%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
 Frame = +2

Query: 149 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 328
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA TEL D
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67

Query: 329 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE 505
           VG QT+ +G+ +            DP K TV +YGHLDVQPALK DGW T PFEL E + 
Sbjct: 68  VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127

Query: 506 KLYGR 520
           KL+GR
Sbjct: 128 KLFGR 132


>AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p
           protein.
          Length = 654

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 146 FFPLPFLQKLVWNSLNN 96
           F PLPF+Q L W++L N
Sbjct: 38  FLPLPFVQSLKWSNLPN 54


>AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA
           protein.
          Length = 654

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 146 FFPLPFLQKLVWNSLNN 96
           F PLPF+Q L W++L N
Sbjct: 38  FLPLPFVQSLKWSNLPN 54


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,777,190
Number of Sequences: 53049
Number of extensions: 475670
Number of successful extensions: 1260
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)