Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321C12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14443-1|CAA74795.1| 394|Homo sapiens zinc finger protein protein. 30 4.3
BC054005-1|AAH54005.1| 393|Homo sapiens zinc finger protein 200... 30 4.3
BC032575-1|AAH32575.1| 395|Homo sapiens zinc finger protein 200... 30 4.3
BC012909-1|AAH12909.1| 395|Homo sapiens zinc finger protein 200... 30 4.3
AJ003147-4|CAA05905.1| 394|Homo sapiens zinc finger protein pro... 30 4.3
AF060866-1|AAC70008.1| 394|Homo sapiens zinc finger protein ZNF... 30 4.3
AB209219-1|BAD92456.1| 272|Homo sapiens zinc finger protein 200... 30 4.3
BC019922-1|AAH19922.1| 422|Homo sapiens ZNF252 protein protein. 30 5.7
AL031729-5|CAI19619.1| 1603|Homo sapiens AT hook, DNA binding mo... 30 5.7
>Y14443-1|CAA74795.1| 394|Homo sapiens zinc finger protein protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 327 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 386
Query: 262 A 264
A
Sbjct: 387 A 387
>BC054005-1|AAH54005.1| 393|Homo sapiens zinc finger protein 200
protein.
Length = 393
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 326 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 385
Query: 262 A 264
A
Sbjct: 386 A 386
>BC032575-1|AAH32575.1| 395|Homo sapiens zinc finger protein 200
protein.
Length = 395
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 328 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 387
Query: 262 A 264
A
Sbjct: 388 A 388
>BC012909-1|AAH12909.1| 395|Homo sapiens zinc finger protein 200
protein.
Length = 395
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 328 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 387
Query: 262 A 264
A
Sbjct: 388 A 388
>AJ003147-4|CAA05905.1| 394|Homo sapiens zinc finger protein
protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 327 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 386
Query: 262 A 264
A
Sbjct: 387 A 387
>AF060866-1|AAC70008.1| 394|Homo sapiens zinc finger protein ZNF200
protein.
Length = 394
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 327 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 386
Query: 262 A 264
A
Sbjct: 387 A 387
>AB209219-1|BAD92456.1| 272|Homo sapiens zinc finger protein 200
variant protein.
Length = 272
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 88 GTDVHETVYS*PSHTRRYPPHVDHVIHLPITNKTTHHRFNECGRRI--YSDELQHEKQRK 261
G + E ++ P + +P + + V+HL + +CGRR S+ +HEK
Sbjct: 205 GIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAERPYGCKKCGRRFGRLSNCTRHEKTHS 264
Query: 262 A 264
A
Sbjct: 265 A 265
>BC019922-1|AAH19922.1| 422|Homo sapiens ZNF252 protein protein.
Length = 422
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 133 RRYPPHVDHVIHLPITNKTTHHRFNECGRRI-YSDELQHEKQ 255
+ + H +V HL I HH N+CG+ +S L H ++
Sbjct: 262 KAFSTHSSYVQHLKIHTGEKHHECNQCGKAFSHSSNLIHHQR 303
>AL031729-5|CAI19619.1| 1603|Homo sapiens AT hook, DNA binding
motif, containing 1 protein.
Length = 1603
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 327 QCSPSRSWQPSSPAFSYEQPAT*ATCHKL 413
+CSP R W PS P ++ P T + H L
Sbjct: 631 RCSPPRCWTPSEPESVHQAPDTQSISHFL 659
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,842,757
Number of Sequences: 237096
Number of extensions: 1787720
Number of successful extensions: 3894
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3894
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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