Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321C12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3339|AAF51579.1|  291|Drosophila melanogaster CG5665-PA...    30   2.2  
U43582-1|AAC46969.1|  966|Drosophila melanogaster KSR protein.         28   8.8  
BT024944-1|ABE01174.1|  244|Drosophila melanogaster IP16026p pro...    28   8.8  

>AE014296-3339|AAF51579.1|  291|Drosophila melanogaster CG5665-PA
           protein.
          Length = 291

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 157 GRHAADTGACVTVRSTRSRARQYHASDYRPANRLNFGNKQCGA 29
           G H    G C+T+  + +RA +Y A    P    NF  K+C +
Sbjct: 191 GAHPIQPG-CLTIGCSHTRAVEYFAESAYPHQEKNFMGKKCAS 232


>U43582-1|AAC46969.1|  966|Drosophila melanogaster KSR protein.
          Length = 966

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
 Frame = +2

Query: 59  TISGSVITGVVLTCTRPCTPDRHTRAGIRRMSTT*YICRSPTK-------LPTTGSMSVD 217
           T++GS++     T T    P + + AG+ + +     C    K       +  +GS S D
Sbjct: 584 TLTGSLVNSTTTTSTCSFFPRKLSTAGVDKRTPFTSECTDTHKSNDSDKTVSLSGSASTD 643

Query: 218 AEYIPTNYNMRNNVKQSFWRPRTDAEKRW 304
           ++  P   +   +     WR  + + K W
Sbjct: 644 SDRTPVRVDSTEDGDSGQWRQNSISLKEW 672


>BT024944-1|ABE01174.1|  244|Drosophila melanogaster IP16026p
           protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query: 102 RDRVL-LTVTHAPVSAACRPRNTFADHQQNYPPQVQ 206
           R+R++ +T+   P  AA +P   F  +Q NYPPQ Q
Sbjct: 9   RERIIPITLEQTPTYAAAQPN--FGGYQ-NYPPQAQ 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,241,215
Number of Sequences: 53049
Number of extensions: 569636
Number of successful extensions: 1588
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)