Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321C12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.36 
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    24   0.82 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 203 NLWWVVLLVIGKCIT 159
           N WW ++LVI  C+T
Sbjct: 186 NSWWALILVIVPCLT 200


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 358 HRQPSPTNN 384
           HRQP+PTNN
Sbjct: 97  HRQPAPTNN 105


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 247 EKQRKAIVLATSH*R*ETMDDDSWSGRSARRRVLGSLHRQPSPTNN 384
           EK+++  ++     R +T+D  S + +  R+R +G +  Q +  NN
Sbjct: 82  EKRKEVSIITEDSSRKQTIDPLSSNTQITRKRRVGIVENQYAVENN 127


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -1

Query: 155 STCGGYRRVCDGQEYTVSCTSVPRQ*LPTR*SFKLRK 45
           ST  G R +CD Q Y +  T      L TR S  L K
Sbjct: 301 STEIGSRDLCDVQRYNLLETIATHMGLDTRTSTSLWK 337


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 209 SLNLWWVVL 183
           S N+WW++L
Sbjct: 2   SFNIWWLIL 10


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 167 ICRSPTKLPTTGSMSVD 217
           +CR   KLP  G   +D
Sbjct: 647 VCRGKLKLPPDGRTEID 663


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,864
Number of Sequences: 438
Number of extensions: 3459
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)