Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321C11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110510-1|AAI10511.2| 805|Homo sapiens KIAA1546 protein protein. 30 5.7
BC110509-1|AAI10510.1| 805|Homo sapiens KIAA1546 protein protein. 30 5.7
AB046766-1|BAB13372.1| 684|Homo sapiens KIAA1546 protein protein. 30 5.7
X67235-1|CAA47661.1| 270|Homo sapiens huprobox protein. 29 7.5
L16499-1|AAA02988.1| 270|Homo sapiens homeobox protein protein. 29 7.5
BC050638-1|AAH50638.1| 270|Homo sapiens hematopoietically expre... 29 7.5
BC015110-1|AAH15110.1| 270|Homo sapiens hematopoietically expre... 29 7.5
BC014336-1|AAH14336.1| 270|Homo sapiens hematopoietically expre... 29 7.5
AL590080-2|CAH74086.1| 270|Homo sapiens hematopoietically expre... 29 7.5
EF091824-1|ABK78776.1| 1437|Homo sapiens mucin 4 protein. 29 9.9
AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400856-1|CAC14141.1| 1256|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400855-1|CAC14140.1| 1215|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400854-1|CAC14139.1| 1214|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400852-1|CAC14137.1| 1199|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400851-1|CAC14136.1| 1187|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400850-1|CAC14135.1| 1157|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400849-1|CAC14134.1| 1157|Homo sapiens MUC4 protein splice var... 29 9.9
AJ400633-1|CAC10062.1| 1187|Homo sapiens MUC4 protein variant VI... 29 9.9
AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice var... 29 9.9
AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3 pro... 29 9.9
AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein. 29 9.9
AJ000281-1|CAA03985.1| 1045|Homo sapiens mucin protein. 29 9.9
AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein. 29 9.9
AF058803-1|AAC34750.1| 944|Homo sapiens mucin 4 protein. 29 9.9
>BC110510-1|AAI10511.2| 805|Homo sapiens KIAA1546 protein protein.
Length = 805
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +3
Query: 138 STEVRRRINFYKTVEPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNYDTPVYLNTYQ 317
S +R ++ + P P HE A + +L N+DY N +++ ++ Y
Sbjct: 511 SCTIRPNVHHVGKLPPYPTHEMDGHFMGATSRLPPNLSNPNMDYKNGEHHSPSHVIHNYS 570
Query: 318 HEPIGFN 338
P FN
Sbjct: 571 AAPGMFN 577
>BC110509-1|AAI10510.1| 805|Homo sapiens KIAA1546 protein protein.
Length = 805
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +3
Query: 138 STEVRRRINFYKTVEPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNYDTPVYLNTYQ 317
S +R ++ + P P HE A + +L N+DY N +++ ++ Y
Sbjct: 511 SCTIRPNVHHVGKLPPYPTHEMDGHFMGATSRLPPNLSNPNMDYKNGEHHSPSHVIHNYS 570
Query: 318 HEPIGFN 338
P FN
Sbjct: 571 AAPGMFN 577
>AB046766-1|BAB13372.1| 684|Homo sapiens KIAA1546 protein protein.
Length = 684
Score = 29.9 bits (64), Expect = 5.7
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = +3
Query: 138 STEVRRRINFYKTVEPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNYDTPVYLNTYQ 317
S +R ++ + P P HE A + +L N+DY N +++ ++ Y
Sbjct: 390 SCTIRPNVHHVGKLPPYPTHEMDGHFMGATSRLPPNLSNPNMDYKNGEHHSPSHIIHNYS 449
Query: 318 HEPIGFN 338
P FN
Sbjct: 450 AAPGMFN 456
>X67235-1|CAA47661.1| 270|Homo sapiens huprobox protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>L16499-1|AAA02988.1| 270|Homo sapiens homeobox protein protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>BC050638-1|AAH50638.1| 270|Homo sapiens hematopoietically
expressed homeobox protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>BC015110-1|AAH15110.1| 270|Homo sapiens hematopoietically
expressed homeobox protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>BC014336-1|AAH14336.1| 270|Homo sapiens hematopoietically
expressed homeobox protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>AL590080-2|CAH74086.1| 270|Homo sapiens hematopoietically
expressed homeobox protein.
Length = 270
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 102 STPINGKTIINPSTEVRRRINFYKT--VEPAPVHETFSDHNNAGNA 233
+ P T+ +P++ ++ Y+T EP P+H FS H+ A A
Sbjct: 43 AAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALA 88
>EF091824-1|ABK78776.1| 1437|Homo sapiens mucin 4 protein.
Length = 1437
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400858-1|CAC14143.1| 2167|Homo sapiens MUC4 protein splice
variant sv21 protein.
Length = 2167
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400857-1|CAC14142.1| 1827|Homo sapiens MUC4 protein splice
variant sv20 protein.
Length = 1827
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400856-1|CAC14141.1| 1256|Homo sapiens MUC4 protein splice
variant sv19 protein.
Length = 1256
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400855-1|CAC14140.1| 1215|Homo sapiens MUC4 protein splice
variant sv18 protein.
Length = 1215
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400854-1|CAC14139.1| 1214|Homo sapiens MUC4 protein splice
variant sv17 protein.
Length = 1214
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400853-1|CAC14138.1| 1201|Homo sapiens MUC4 protein splice
variant sv16 protein.
Length = 1201
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400852-1|CAC14137.1| 1199|Homo sapiens MUC4 protein splice
variant sv15 protein.
Length = 1199
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400851-1|CAC14136.1| 1187|Homo sapiens MUC4 protein splice
variant sv14 protein.
Length = 1187
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400850-1|CAC14135.1| 1157|Homo sapiens MUC4 protein splice
variant sv13 protein.
Length = 1157
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400849-1|CAC14134.1| 1157|Homo sapiens MUC4 protein splice
variant sv12 protein.
Length = 1157
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ400633-1|CAC10062.1| 1187|Homo sapiens MUC4 protein variant VI1
protein.
Length = 1187
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice
variant sv11 protein.
Length = 1107
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ277412-1|CAC10061.1| 2117|Homo sapiens mucin 4, variant V3
protein.
Length = 2117
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ276359-1|CAB81773.1| 2169|Homo sapiens mucin 4 protein.
Length = 2169
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AJ000281-1|CAA03985.1| 1045|Homo sapiens mucin protein.
Length = 1045
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AF522055-1|AAM66747.1| 2169|Homo sapiens MUC4 protein.
Length = 2169
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 329 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 387
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 388 VSNTFLVTSKVFRMPISRDSTLGNT 412
>AF058803-1|AAC34750.1| 944|Homo sapiens mucin 4 protein.
Length = 944
Score = 29.1 bits (62), Expect = 9.9
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 228 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKS 407
N S+ + N N TPV +T P GFNP ++ +T+++ S
Sbjct: 243 NHQTQSVETTRVSQINTLNTLTPVTTSTVLSSPSGFNPSGTVS-QETFPSGETTISSPSS 301
Query: 408 IPVTFATHS----IPYSKTSYLSDT 470
+ TF S +P S+ S L +T
Sbjct: 302 VSNTFLVTSKVFRMPISRDSTLGNT 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,274,487
Number of Sequences: 237096
Number of extensions: 1624120
Number of successful extensions: 3640
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3637
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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