Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321C09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070563-1|AAL48034.1|  351|Drosophila melanogaster LD40940p pro...   101   6e-22
AE014134-526|AAF51172.1|  351|Drosophila melanogaster CG3165-PA ...   101   6e-22
AE013599-1483|AAF58514.3|  467|Drosophila melanogaster CG13157-P...    30   2.2  
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    29   2.9  

>AY070563-1|AAL48034.1|  351|Drosophila melanogaster LD40940p
           protein.
          Length = 351

 Score =  101 bits (242), Expect = 6e-22
 Identities = 61/161 (37%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
 Frame = +1

Query: 67  RVTTYVFFDIETTGLPFQERNKTKITELCFLAVS---------RDDLDTQSGLPP----I 207
           +++T+   D+ETT LP    N+  ITELC  A             D D Q  LP     +
Sbjct: 16  KISTFAVLDLETTNLPAYRNNRVSITELCIYAFEAALLKKKKKEQDQDEQQELPAAPRVL 75

Query: 208 KKLSFVLNPEKRIHPDVVVLTGLTNESLKNAPTFK-QRANAIVSFLNELPKPICLVAHNG 384
            KL+ +  P   + P+   +TGL+N  L+         A  IVSFL  LP P+CLVAHNG
Sbjct: 76  HKLNVLFQPSMVVDPEAERITGLSNYLLERESQLDTDAAQLIVSFLKHLPSPVCLVAHNG 135

Query: 385 NSFDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQK 507
             FD+ IL        I LP  L C+DSL  F +I  T QK
Sbjct: 136 WGFDFPILRQAFEKLNIELPQSLTCVDSLRAFMEIDDTQQK 176


>AE014134-526|AAF51172.1|  351|Drosophila melanogaster CG3165-PA
           protein.
          Length = 351

 Score =  101 bits (242), Expect = 6e-22
 Identities = 61/161 (37%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
 Frame = +1

Query: 67  RVTTYVFFDIETTGLPFQERNKTKITELCFLAVS---------RDDLDTQSGLPP----I 207
           +++T+   D+ETT LP    N+  ITELC  A             D D Q  LP     +
Sbjct: 16  KISTFAVLDLETTNLPAYRNNRVSITELCIYAFEAALLKKKKKEQDQDEQQELPAAPRVL 75

Query: 208 KKLSFVLNPEKRIHPDVVVLTGLTNESLKNAPTFK-QRANAIVSFLNELPKPICLVAHNG 384
            KL+ +  P   + P+   +TGL+N  L+         A  IVSFL  LP P+CLVAHNG
Sbjct: 76  HKLNVLFQPSMVVDPEAERITGLSNYLLERESQLDTDAAQLIVSFLKHLPSPVCLVAHNG 135

Query: 385 NSFDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQK 507
             FD+ IL        I LP  L C+DSL  F +I  T QK
Sbjct: 136 WGFDFPILRQAFEKLNIELPQSLTCVDSLRAFMEIDDTQQK 176


>AE013599-1483|AAF58514.3|  467|Drosophila melanogaster CG13157-PA
           protein.
          Length = 467

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +1

Query: 52  IHKMVRVTTYVFFDIETTGLPFQERNKTKITELCF-LAVSRDDLDTQSGLPPIKKLSFV 225
           +H  + V   V  +I   G+P+++RN ++   +C  L VS   L + S +P + ++  V
Sbjct: 335 MHSELSVPETVPLNITRVGIPYEDRNASEEPTICVPLTVSETSLSSDSIVPQLVEVERV 393


>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 244 IHPDVVVLTGLTNESLKNAPTFKQRANAIVSFLNELPKPICLV 372
           IHP+ V  T    + LKNAP+  QR   +++ L +L     +V
Sbjct: 557 IHPESVEYTAFVPDGLKNAPSVFQR--TVINALGDLANSFVIV 597


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,057,873
Number of Sequences: 53049
Number of extensions: 434349
Number of successful extensions: 985
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)