Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321C09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical pr...    29   1.5  
CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical ...    29   2.7  
U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    28   4.7  
AF106573-2|AAC78153.1|  229|Caenorhabditis elegans Regulator of ...    28   4.7  
AC024836-2|AAK39348.1|  229|Caenorhabditis elegans Regulator of ...    28   4.7  
AF047653-5|AAT92057.1|  117|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF047653-4|AAQ91897.1|  113|Caenorhabditis elegans Hypothetical ...    27   8.1  
AF047653-3|AAC04460.2|  378|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
           protein C25F9.2 protein.
          Length = 1469

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +1

Query: 367 LVAHNGNSFDYKILLAECN-DAGI 435
           +VAHNG S+D+ +LLAE +  AGI
Sbjct: 711 IVAHNGGSYDHVMLLAELDRQAGI 734


>Z81066-5|CAB02969.1|  777|Caenorhabditis elegans Hypothetical
           protein F17B5.1a protein.
          Length = 777

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +1

Query: 292 KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLA--ECN-DAGILLPSDLLCI 462
           K   +FK R    V FLN   + I ++    + F YK+  A   C+ D  I L    L  
Sbjct: 111 KKIASFKGRQQKAVGFLNSGLEEIRILTSPNDKFCYKVKNASWRCSVDNSIDLQKIKLIC 170

Query: 463 DSLIGFRKILKTT 501
           + LIG  K ++ T
Sbjct: 171 EKLIGLEKKMEVT 183


>CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical
           protein K09E10.1 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 196 LPPIKKLSFVLNPEKRIHPDVVVLTGLTNESLKNAPTFKQRANAIV 333
           LP IKK  ++L+   R+H DV+       + LK+  TF++ + A++
Sbjct: 573 LPNIKKKLYILDSFPRVHGDVIPHIA---DDLKDGKTFEEISKALL 615


>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 41  SKRSSIKWFELQLTYFSTSKQQVCRFKKEIKLRSPNYVF 157
           SK++         TYF++   Q+ RF  +I  + PN+ F
Sbjct: 305 SKKTKFLQKNGNFTYFTSKNSQIYRFSAQIPPKIPNFSF 343


>AF106573-2|AAC78153.1|  229|Caenorhabditis elegans Regulator of g
           protein signalingprotein 8.1 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 147 FGDLSFISFLKRQTCCFDVEKYVSCNSNHFMD 52
           +G   F+ FLK+QT   DV+ +++C  + + +
Sbjct: 111 YGSKLFVQFLKQQTSADDVDFWLACAKHRWTE 142


>AC024836-2|AAK39348.1|  229|Caenorhabditis elegans Regulator of g
           protein signalingprotein 8.2 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 147 FGDLSFISFLKRQTCCFDVEKYVSCNSNHFMD 52
           +G   F+ FLK+QT   DV+ +++C  + + +
Sbjct: 111 YGSKLFVQFLKQQTSADDVDFWLACAKHRWTE 142


>AF047653-5|AAT92057.1|  117|Caenorhabditis elegans Hypothetical
           protein W02F12.4c protein.
          Length = 117

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 70  VTTYVFFDIETTGL 111
           + TYVFFD+E TGL
Sbjct: 69  IKTYVFFDLECTGL 82


>AF047653-4|AAQ91897.1|  113|Caenorhabditis elegans Hypothetical
           protein W02F12.4b protein.
          Length = 113

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 70  VTTYVFFDIETTGL 111
           + TYVFFD+E TGL
Sbjct: 69  IKTYVFFDLECTGL 82


>AF047653-3|AAC04460.2|  378|Caenorhabditis elegans Hypothetical
           protein W02F12.4a protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 70  VTTYVFFDIETTGL 111
           + TYVFFD+E TGL
Sbjct: 69  IKTYVFFDLECTGL 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,425
Number of Sequences: 27780
Number of extensions: 242523
Number of successful extensions: 600
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)