Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321C04f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 303 6e-83
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 200 4e-52
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 200 4e-52
AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical ... 142 1e-34
AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical ... 142 1e-34
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 132 1e-31
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 76 1e-14
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 75 2e-14
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 75 2e-14
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 71 5e-13
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 68 5e-12
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 60 9e-10
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 60 1e-09
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 59 2e-09
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 59 2e-09
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical ... 57 9e-09
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 51 6e-07
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 51 6e-07
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 51 6e-07
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 51 6e-07
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 51 6e-07
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 49 2e-06
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 49 2e-06
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 48 5e-06
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 46 2e-05
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 40 0.001
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 37 0.008
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 34 0.054
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 33 0.16
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 6.2
AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical... 27 6.2
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 6.2
Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 303 bits (743), Expect = 6e-83
Identities = 141/173 (81%), Positives = 161/173 (93%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFDRQI+VP PDIKGRASIF+VHL PL+T+L+K L+RK+AA TPGF+GADI+NV
Sbjct: 450 LLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNV 509
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYHEAGHAVAGWF 361
CNEAALIAAR+ ++I+ K+FEQAIERVVAGMEKK+ VLQ +E+K VAYHEAGHA+AGWF
Sbjct: 510 CNEAALIAARDANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWF 569
Query: 362 LQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYSKEQLFDRMCMTLGGRVSEEI 520
LQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYSK+QL DRMCMTLGGRV+EEI
Sbjct: 570 LQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYSKDQLLDRMCMTLGGRVAEEI 622
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 200 bits (489), Expect = 4e-52
Identities = 91/174 (52%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFDR I + P + R +F++++ +K + ++++AALTPGFTGADI NV
Sbjct: 446 LLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNV 505
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYHEAGHAVAGWF 361
CNE+A+ AA + +T K+ E A++RV+AG EK+S L +ER++VAYHEAGHA+ GW
Sbjct: 506 CNESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWM 565
Query: 362 LQHADPLLKVSIIPR-GKGLGYAQYLPKEQYLYSKEQLFDRMCMTLGGRVSEEI 520
L+H D LLKV+IIPR LG+AQY P++++L+SK++LFDRMCM LGGR +E +
Sbjct: 566 LEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELFDRMCMMLGGRCAENL 619
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 200 bits (489), Expect = 4e-52
Identities = 91/174 (52%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFDR I + P + R +F++++ +K + ++++AALTPGFTGADI NV
Sbjct: 446 LLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNV 505
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYHEAGHAVAGWF 361
CNE+A+ AA + +T K+ E A++RV+AG EK+S L +ER++VAYHEAGHA+ GW
Sbjct: 506 CNESAIRAASNKCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWM 565
Query: 362 LQHADPLLKVSIIPR-GKGLGYAQYLPKEQYLYSKEQLFDRMCMTLGGRVSEEI 520
L+H D LLKV+IIPR LG+AQY P++++L+SK++LFDRMCM LGGR +E +
Sbjct: 566 LEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELFDRMCMMLGGRCAENL 619
>AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical
protein Y108F1.1 protein.
Length = 238
Score = 142 bits (345), Expect = 1e-34
Identities = 64/130 (49%), Positives = 92/130 (70%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFDR I + P + R +F++++ +K + ++++A LTP FTGADI NV
Sbjct: 92 LLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNV 151
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYHEAGHAVAGWF 361
CNE+A+ AA + +T+K+ E A++RV+AG EK+S L +ER++VAYHEAGHA+ GW
Sbjct: 152 CNESAIRAASNKCHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWM 211
Query: 362 LQHADPLLKV 391
L+H D LLKV
Sbjct: 212 LEHTDALLKV 221
>AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical
protein Y47C4A.1 protein.
Length = 238
Score = 142 bits (345), Expect = 1e-34
Identities = 64/130 (49%), Positives = 92/130 (70%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFDR I + P + R +F++++ +K + ++++A LTP FTGADI NV
Sbjct: 92 LLRPGRFDRHISIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAVLTPSFTGADIMNV 151
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYHEAGHAVAGWF 361
CNE+A+ AA + +T+K+ E A++RV+AG EK+S L +ER++VAYHEAGHA+ GW
Sbjct: 152 CNESAIRAASNKCHVVTIKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWM 211
Query: 362 LQHADPLLKV 391
L+H D LLKV
Sbjct: 212 LEHTDALLKV 221
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 132 bits (319), Expect = 1e-31
Identities = 71/175 (40%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGRFD ++ VP PD+ GR IF +L+ + + + + +A + GFTGADI N+
Sbjct: 354 LLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGGID--PKVLAKGSTGFTGADIENM 411
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSNVLQPDE-RKIVAYHEAGHAVAGW 358
N+AAL AA + A ++TM ++A +RV+ G + + +E + AYHEAGH +
Sbjct: 412 VNQAALKAATDNAVEVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSL 471
Query: 359 FLQHADPLLKVSIIPRGKGLGYAQYLP-KEQYLYSKEQLFDRMCMTLGGRVSEEI 520
+ + A PL KV+IIPRG+ LG+ LP K+ Y +K Q+ + + +GGRV+EE+
Sbjct: 472 YTKDATPLHKVTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEEL 526
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 76.2 bits (179), Expect = 1e-14
Identities = 40/96 (41%), Positives = 59/96 (61%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I PAPD K RA I K+H + + N+A K+A PG +GA++ +V
Sbjct: 315 LLRPGRIDRKIEFPAPDEKARADILKIHSRKM-NLMRGINMA-KIAEQIPGASGAEVKSV 372
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKS 289
C EA + A RE +T ++FE A+ +V+ +K+
Sbjct: 373 CTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKN 408
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 75.4 bits (177), Expect = 2e-14
Identities = 40/96 (41%), Positives = 57/96 (59%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I PAPD K RA I K+H K L + K+A PG +GA++ +V
Sbjct: 310 LLRPGRIDRKIEFPAPDEKARAQILKIH--SRKMNLMRGIRMDKIAEQIPGASGAEVKSV 367
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKS 289
C EA + A RE +T ++FE A+ +V+ +K+
Sbjct: 368 CTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKN 403
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 75.4 bits (177), Expect = 2e-14
Identities = 40/96 (41%), Positives = 57/96 (59%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I PAPD K RA I K+H K L + K+A PG +GA++ +V
Sbjct: 331 LLRPGRIDRKIEFPAPDEKARAQILKIH--SRKMNLMRGIRMDKIAEQIPGASGAEVKSV 388
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKS 289
C EA + A RE +T ++FE A+ +V+ +K+
Sbjct: 389 CTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKN 424
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 70.9 bits (166), Expect = 5e-13
Identities = 38/96 (39%), Positives = 55/96 (57%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L+RPGR DR++ PD+ GRA I K+H + ++ ++ +A L P TGA+I +V
Sbjct: 333 LMRPGRLDRKVEFALPDLAGRAHILKIHAKQM--SVERDIRYDLLARLCPNSTGAEIRSV 390
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKS 289
C EA + A R T K+F +AI +VV G K S
Sbjct: 391 CTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFS 426
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 67.7 bits (158), Expect = 5e-12
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L+RPGR DR+I P PD K + IF++H + + TL KE + +GADI +
Sbjct: 344 LIRPGRIDRKIEFPLPDEKTKRRIFQIHTS--RMTLGKEVNLEEFITAKDELSGADIKAM 401
Query: 182 CNEAALIAARELANDITMKNFEQAIERVV 268
C EA L+A RE +TM++F+++ E V+
Sbjct: 402 CTEAGLLALRERRMRVTMEDFQKSKENVL 430
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 60.1 bits (139), Expect = 9e-10
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHL--TPLKTTLNKENLARKMAALTPGFTGADIA 175
+LRPGR D+ I++P PD R IFK L TPL L+ LA+ T GF+GAD+
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN----TVGFSGADLT 693
Query: 176 NVCNEAALIAARE-LANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYH 331
+C A +A RE + +I + Q +R G E + L +I H
Sbjct: 694 EICQRACKLAIRESIEREIRQEKERQ--DRSARGEELMEDELADPVPEITRAH 744
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L R GRFDR+I + PD GR I ++H +K L ++ ++A GF GAD+A++
Sbjct: 362 LRRFGRFDREIDIGIPDAVGRLEILRIHTKNMK--LGEDVDLEQVANECHGFVGADLASL 419
Query: 182 CNEAALIAARE 214
C+EAA+ RE
Sbjct: 420 CSEAAIQQIRE 430
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 60.1 bits (139), Expect = 9e-10
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHL--TPLKTTLNKENLARKMAALTPGFTGADIA 175
+LRPGR D+ I++P PD R IFK L TPL L+ LA+ T GF+GAD+
Sbjct: 638 VLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKN----TVGFSGADLT 693
Query: 176 NVCNEAALIAARE-LANDITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYH 331
+C A +A RE + +I + Q +R G E + L +I H
Sbjct: 694 EICQRACKLAIRESIEREIRQEKERQ--DRSARGEELMEDELADPVPEITRAH 744
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L R GRFDR+I + PD GR I ++H +K L ++ ++A GF GAD+A++
Sbjct: 362 LRRFGRFDREIDIGIPDAVGRLEILRIHTKNMK--LGEDVDLEQVANECHGFVGADLASL 419
Query: 182 CNEAALIAARE 214
C+EAA+ RE
Sbjct: 420 CSEAAIQQIRE 430
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 60.1 bits (139), Expect = 9e-10
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L+RPGR DR+I +P PD K R IF +H + + T+ K + +GA+I V
Sbjct: 339 LIRPGRIDRKIELPKPDEKTRQKIFTIHTSGM--TIQKAVTYENVLGKEKSISGAEIKAV 396
Query: 182 CNEAALIAARELANDITMKNFEQAIERVV 268
C EA ++A R + +FE+A++ V+
Sbjct: 397 CTEAGMLALRAQRKCVGTDDFEKAVKSVM 425
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/97 (38%), Positives = 51/97 (52%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLR GR DR+I +P P+ RA I ++H K +NK+ ++A T F GA V
Sbjct: 333 LLRSGRLDRKIELPHPNEDARARIMQIHSR--KMNVNKDVNFEELARCTDDFNGAQCKAV 390
Query: 182 CNEAALIAARELANDITMKNFEQAIERVVAGMEKKSN 292
C EA +IA R A +I ++F AI V A + N
Sbjct: 391 CVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLN 427
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I + P+ + R I K+H K T + E + L+ GF+ AD+ NV
Sbjct: 298 LLRPGRLDRKIEIGLPNEQSRLEILKIHSN--KITKHGEIDFEAVVKLSDGFSAADLRNV 355
Query: 182 CNEAALIAARELANDITMKNFEQAIERV 265
C EA + A R + ++F +A+ +V
Sbjct: 356 CTEAGMFAIRAEREFVIDEDFMKAVRKV 383
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I + P+ + R I K+H K T + E + L+ GF+ AD+ NV
Sbjct: 306 LLRPGRLDRKIEIGLPNEQSRLEILKIHSN--KITKHGEIDFEAVVKLSDGFSAADLRNV 363
Query: 182 CNEAALIAARELANDITMKNFEQAIERV 265
C EA + A R + ++F +A+ +V
Sbjct: 364 CTEAGMFAIRAEREFVIDEDFMKAVRKV 391
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 57.6 bits (133), Expect = 5e-09
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
+LRPGR D+ I++P PD R I K L KT L+K+ +A T GF+GAD+ +
Sbjct: 640 VLRPGRLDQLIYIPLPDEASRHQILKASLR--KTPLSKDLDLTFLAKNTVGFSGADLTEI 697
Query: 182 CNEAALIAARE 214
C A +A RE
Sbjct: 698 CQRACKLAIRE 708
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/71 (42%), Positives = 42/71 (59%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L R GRFDR+I + PD GR I ++H +K L + ++A GF GAD+A++
Sbjct: 363 LRRFGRFDREIDIGIPDAVGRLEILRIHTKNMK--LADDVDLEQIANECHGFVGADLASL 420
Query: 182 CNEAALIAARE 214
C+EAAL RE
Sbjct: 421 CSEAALQQIRE 431
>AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical
protein Y73B3A.21 protein.
Length = 223
Score = 56.8 bits (131), Expect = 9e-09
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Frame = +2
Query: 386 KVSIIPR-GKGLGYAQYLPKE-QYLYSKEQLFDRMCMTLGGRVSEEI 520
+V+IIP+ LG+AQY P++ ++LYSK++LFDRMCM LGGR +E +
Sbjct: 78 QVTIIPQTSAALGFAQYSPRDDKHLYSKDELFDRMCMMLGGRCAENL 124
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR I+V P R +I ++ +K + K+ T G++GA++ V
Sbjct: 613 LLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTID-KLVEKTSGYSGAELVAV 671
Query: 182 CNEAALIAAREL--ANDITMKNFEQAIERVVAGME 280
C AA+ A RE A + +FEQA+ VV+ E
Sbjct: 672 CRTAAMFAMRESIDATIVQWTHFEQALAAVVSRTE 706
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 549 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 608
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 609 CTEAVLIGLR 618
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 547 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 606
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 607 CTEAVLIGLR 616
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 549 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 608
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 609 CTEAVLIGLR 618
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 549 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 608
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 609 CTEAVLIGLR 618
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 547 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 606
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 607 CTEAVLIGLR 616
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 549 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 608
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 609 CTEAVLIGLR 618
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 50.8 bits (116), Expect = 6e-07
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
LLRPGR DR+I P PD + + +F + + L+ + A +GADI ++
Sbjct: 317 LLRPGRLDRKIEFPLPDRRQKRLVFSTVCS--RMNLSDDVDLEDWVARPDKISGADINSI 374
Query: 182 CNEAALIAARELANDITMKNFEQAIERVV 268
C EA + A RE + K+ E+A + VV
Sbjct: 375 CQEAGMQAVRENRYVVLTKDLEKAYKNVV 403
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 50.8 bits (116), Expect = 6e-07
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L RPGRFDR++ PD+ R I +H + + +A T G+ GAD+ +
Sbjct: 549 LRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFL 608
Query: 182 CNEAALIAAR 211
C EA LI R
Sbjct: 609 CTEAVLIGLR 618
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANVCNEAA 196
RF +++++ P+ + R I + L + + NL R + LT G++GAD+ +C EAA
Sbjct: 473 RFQKRLYIALPEPESRTQIVQNLLVGTRHDITNHNLER-IRELTDGYSGADMRQLCTEAA 531
Query: 197 LIAARELANDITMKNFEQAIERVVAGMEKKSNVLQP--DERKIVAY 328
+ R++ +DI + + V + + V++P D+ ++ AY
Sbjct: 532 MGPIRDIGDDIETIDKDDIRAVTVMDFAEAARVVRPTVDDSQLDAY 577
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 49.6 bits (113), Expect = 1e-06
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIF-KVHLTPLKTTLNKENLARKMAAL--TPGFTGADI 172
+LRPGR D+ +FV P ++ R I K + L ++ ++A L GFTGAD+
Sbjct: 687 ILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADL 746
Query: 173 ANVCNEAALIA--ARELAND-----ITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYH 331
A + +E++L+A AR L ND + M++F +A R+ + + +KI
Sbjct: 747 AALIHESSLLALQARVLENDESVKGVGMRHFREAASRIRPSVTEADRKKYEHMKKIYGLK 806
Query: 332 EA 337
+A
Sbjct: 807 QA 808
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L R GRF+ +I + PD R I + K L + +++A LTPG+ GAD+ +
Sbjct: 387 LRRAGRFENEISLGIPDETAREKILE---KICKVNLAGDVTLKQIAKLTPGYVGADLQAL 443
Query: 182 CNEAALIAARELANDITMKN 241
EAA +A + + I +KN
Sbjct: 444 IREAAKVAIDRVFDTIVVKN 463
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHL--TPLKTTLNKENLARKMAALTPGFTGADIANVCNE 190
RF+++IF+P PDI R + + + TP +N ++LA A T GF+GAD+ ++C
Sbjct: 352 RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLA----ARTEGFSGADVVSLCRT 407
Query: 191 AALIAAR 211
AA+ R
Sbjct: 408 AAINVLR 414
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHL--TPLKTTLNKENLARKMAALTPGFTGADIANVCNE 190
RF+++IF+P PDI R + + + TP +N ++LA A T GF+GAD+ ++C
Sbjct: 352 RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLA----ARTEGFSGADVVSLCRT 407
Query: 191 AALIAAR 211
AA+ R
Sbjct: 408 AAINVLR 414
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHL--TPLKTTLNKENLARKMAALTPGFTGADIANVCNE 190
RF+++IF+P PDI R + + + TP +N ++LA A T GF+GAD+ ++C
Sbjct: 352 RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLA----ARTEGFSGADVVSLCRT 407
Query: 191 AALIAAR 211
AA+ R
Sbjct: 408 AAINVLR 414
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 47.6 bits (108), Expect = 5e-06
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIF-KVHLTPLKTTLNKENLARKMAAL--TPGFTGADI 172
+LRPGR D+ +FV P ++ R I K + L ++ ++A L GFTGAD+
Sbjct: 687 ILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADL 746
Query: 173 ANVCNEAALIA--ARELAND-----ITMKNFEQAIERVVAGMEKKSNVLQPDERKIVAYH 331
A +E +L+A AR L ND + M++F +A R+ + + +KI
Sbjct: 747 AVFIHELSLLALQARVLENDESVKGVGMRHFREAASRIRPSVTEADRKKYEHMKKIYGLK 806
Query: 332 EA 337
+A
Sbjct: 807 QA 808
Score = 45.2 bits (102), Expect = 3e-05
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANV 181
L R GRF +I + PD R I + K L + +++A LTPG+ GAD+ +
Sbjct: 387 LRRTGRFQNEISLGIPDETAREKILE---KICKVNLAGDVTLKQIAKLTPGYVGADLQAL 443
Query: 182 CNEAALIAARELANDITMKN 241
EAA +A + + I +KN
Sbjct: 444 IREAAKVAIDRVFDTIVVKN 463
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK-TTLNKENLARKMAALTPGFTGADIAN 178
LLRPGRFD ++ P+ R I KV LK T ++ E LA+K T G++GAD+
Sbjct: 156 LLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTDVDFECLAQK----TDGWSGADLQL 211
Query: 179 VCNEAALIAARELAND 226
+ A AR++A +
Sbjct: 212 LFTNAQFYNARQIAKE 227
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK-TTLNKENLARKMAALTPGFTGADIAN 178
LLRPGRFD ++ P+ R I KV LK T ++ E LA+K T G++GAD+
Sbjct: 882 LLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTDVDFECLAQK----TDGWSGADLQL 937
Query: 179 VCNEAALIAARELAND 226
+ A AR++A +
Sbjct: 938 LFTNAQFYNARQIAKE 953
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK-TTLNKENLARKMAALTPGFTGADIAN 178
LLRPGRFD ++ P+ R I KV LK T ++ E LA+K T G++GAD+
Sbjct: 882 LLRPGRFDHHVYCGHPEKTERLDIMKVLTNKLKPTDVDFECLAQK----TDGWSGADLQL 937
Query: 179 VCNEAALIAARELAND 226
+ A AR++A +
Sbjct: 938 LFTNAQFYNARQIAKE 953
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/75 (25%), Positives = 41/75 (54%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANVCNEAA 196
RF+++I++P PDI R +F++ + TL ++ + +A G++G DI+ + +A
Sbjct: 275 RFEKRIYIPLPDIHARKEMFRIDVGKNYNTLTDQDF-KVLAERCEGYSGYDISILVKDAL 333
Query: 197 LIAARELANDITMKN 241
+ R + + K+
Sbjct: 334 MQPVRRVQSATHFKH 348
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK--TTLNKENLARKMAALTPGFTGADIA 175
LLRPGR + Q+ V PD GR I K+H ++ ++ ++ T F+GA++
Sbjct: 460 LLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELE 519
Query: 176 NVCNEAALIAAREL 217
+ A A L
Sbjct: 520 GLVRAAQSSAMNRL 533
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK--TTLNKENLARKMAALTPGFTGADIA 175
LLRPGR + Q+ V PD GR I K+H ++ ++ ++ T F+GA++
Sbjct: 460 LLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELE 519
Query: 176 NVCNEAALIAAREL 217
+ A A L
Sbjct: 520 GLVRAAQSSAMNRL 533
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 2 LLRPGRFDRQIFVPAPDIKGRASIFKVHLTPLK--TTLNKENLARKMAALTPGFTGADIA 175
LLRPGR + Q+ V PD GR I K+H ++ ++ ++ T F+GA++
Sbjct: 394 LLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELE 453
Query: 176 NVCNEAALIAAREL 217
+ A A L
Sbjct: 454 GLVRAAQSSAMNRL 467
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 34.3 bits (75), Expect = 0.054
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHLTP--LKTTLNKENLARKMAALTPGFTGADIANVCNE 190
RF ++I + PD + R + L + L ++ R +A+ T GF+ +D+ +C E
Sbjct: 335 RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDI-RYIASNTSGFSNSDLVALCKE 393
Query: 191 AALIAAREL 217
AA++ RE+
Sbjct: 394 AAMVPIREI 402
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANVCNEAA 196
R + VP P+ K R+ I V L K N NL ++A G +G+D+ VC A
Sbjct: 237 RMTARFQVPVPNAKQRSQILNVILRNEKIN-NTVNLG-EIAQAAEGLSGSDLKEVCRLAL 294
Query: 197 LIAAR 211
L A+
Sbjct: 295 LARAK 299
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 32.7 bits (71), Expect = 0.16
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 17 RFDRQIFVPAPDIKGRASIFKVHLTPLKTTLNKENLARKMAALTPGFTGADIANVCNEAA 196
R + VP P+ K R+ I V L K N NL ++A G +G+D+ VC A
Sbjct: 240 RMTARFQVPVPNAKQRSQILNVILRNEKIN-NTVNLG-EIAQAAEGLSGSDLKEVCRLAL 297
Query: 197 LIAAR 211
L A+
Sbjct: 298 LARAK 302
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 178 RVQRGGTNCRSRISQRYYNEKFRTSHRKSRRR 273
R +R T RSR +RY + + R S KSR R
Sbjct: 1537 RRRRSRTRSRSRSRERYRSRRDRRSRTKSRSR 1568
>AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical
protein Y87G2A.13 protein.
Length = 468
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -3
Query: 198 SAASLHTLAISAPVKPGVNAAIFLAKFSLFSVVLRGVKCTLKI 70
S L+TLA+S P++ +A+I A FS VV + TL++
Sbjct: 407 SNTELNTLALSGPIRFVFDASICRAFFSFLLVVTILINFTLQL 449
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 178 RVQRGGTNCRSRISQRYYNEKFRTSHRKSRRR 273
R +R T RSR +RY + + R S KSR R
Sbjct: 162 RRRRSRTRSRSRSRERYRSRRDRRSRTKSRSR 193
>Z75710-8|CAO82023.1| 394|Caenorhabditis elegans Hypothetical
protein D1081.10 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 229 YNEKFRTSHRKSRRRYG 279
Y+ KFR SHR++ RYG
Sbjct: 17 YDSKFRLSHRENEIRYG 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,754,153
Number of Sequences: 27780
Number of extensions: 276219
Number of successful extensions: 736
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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