Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.94 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 96  YLALLF*Q*PSYFGGFSLEGILFATQYC 179
           Y++LL    P+YFG    + +L   +YC
Sbjct: 295 YVSLLLGPHPTYFGKTGRKTVLKTNKYC 322


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 224 LAYSQYRQTFTSMKENIEEYI 286
           LAY + RQ F + K+NI E+I
Sbjct: 284 LAY-KIRQVFPNEKKNISEFI 303


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 406 IDRINHKHNSLSTTLVLF 353
           +DRINHK    +T L+L+
Sbjct: 2   MDRINHKKFINTTKLLLW 19



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -3

Query: 426 SLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIY 280
           S + FC+ I SI   +P+ L    +   + S      + I  + L V+Y
Sbjct: 315 SSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVY 363


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -3

Query: 426 SLISFCILIESITNTIPLALLLCCSKNLFLSLSCPGRSTIFNVLLEVIY 280
           S + FC+ I SI   +P+ L    +   + S      + I  + L V+Y
Sbjct: 40  SSLRFCLNILSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVY 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,690
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)