Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321B10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117370-1|AAI17371.1| 1065|Homo sapiens leucine-rich repeats an...    31   2.4  
BC117368-1|AAI17369.1| 1065|Homo sapiens leucine-rich repeats an...    31   2.4  
AL357055-1|CAH73254.1| 1065|Homo sapiens leucine-rich repeats an...    31   2.4  
AB018349-1|BAA34526.2| 1073|Homo sapiens KIAA0806 protein protein.     31   2.4  
AL117235-1|CAB55302.1|  268|Homo sapiens hypothetical protein pr...    30   5.7  
AL031735-2|CAI22475.1|  268|Homo sapiens patched domain containi...    30   5.7  
X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.        29   9.9  

>BC117370-1|AAI17371.1| 1065|Homo sapiens leucine-rich repeats and
           immunoglobulin-like domains 2 protein.
          Length = 1065

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 21/51 (41%), Positives = 24/51 (47%)
 Frame = -1

Query: 323 CRIYISCRL*VITQTRLSTLQTAAARRCPSTRASCRFTLRGTN**ALP*PS 171
           CR  +  RL  I QT L  L  A A  CP+   SCR  L   +   LP PS
Sbjct: 16  CRSRVLSRLLFIAQTALLLLPAAGAGLCPAP-CSCRIPLLDCSRRKLPAPS 65


>BC117368-1|AAI17369.1| 1065|Homo sapiens leucine-rich repeats and
           immunoglobulin-like domains 2 protein.
          Length = 1065

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 21/51 (41%), Positives = 24/51 (47%)
 Frame = -1

Query: 323 CRIYISCRL*VITQTRLSTLQTAAARRCPSTRASCRFTLRGTN**ALP*PS 171
           CR  +  RL  I QT L  L  A A  CP+   SCR  L   +   LP PS
Sbjct: 16  CRSRVLSRLLFIAQTALLLLPAAGAGLCPAP-CSCRIPLLDCSRRKLPAPS 65


>AL357055-1|CAH73254.1| 1065|Homo sapiens leucine-rich repeats and
           immunoglobulin-like domains 2 protein.
          Length = 1065

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 21/51 (41%), Positives = 24/51 (47%)
 Frame = -1

Query: 323 CRIYISCRL*VITQTRLSTLQTAAARRCPSTRASCRFTLRGTN**ALP*PS 171
           CR  +  RL  I QT L  L  A A  CP+   SCR  L   +   LP PS
Sbjct: 16  CRSRVLSRLLFIAQTALLLLPAAGAGLCPAP-CSCRIPLLDCSRRKLPAPS 65


>AB018349-1|BAA34526.2| 1073|Homo sapiens KIAA0806 protein protein.
          Length = 1073

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 21/51 (41%), Positives = 24/51 (47%)
 Frame = -1

Query: 323 CRIYISCRL*VITQTRLSTLQTAAARRCPSTRASCRFTLRGTN**ALP*PS 171
           CR  +  RL  I QT L  L  A A  CP+   SCR  L   +   LP PS
Sbjct: 24  CRSRVLSRLLFIAQTALLLLPAAGAGLCPAP-CSCRIPLLDCSRRKLPAPS 73


>AL117235-1|CAB55302.1|  268|Homo sapiens hypothetical protein
           protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 318 PAIRGPYRMVRMVPHGHCRQLGPL-DGSCGSSTQATCRWL 434
           PA R P  +   VP G    L  L DG CGS      RWL
Sbjct: 94  PAARAPQHLGHRVPGGDHHVLERLGDGGCGSHLPVHPRWL 133


>AL031735-2|CAI22475.1|  268|Homo sapiens patched domain containing
           2 protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 318 PAIRGPYRMVRMVPHGHCRQLGPL-DGSCGSSTQATCRWL 434
           PA R P  +   VP G    L  L DG CGS      RWL
Sbjct: 94  PAARAPQHLGHRVPGGDHHVLERLGDGGCGSHLPVHPRWL 133


>X58531-1|CAA41418.1| 2628|Homo sapiens laminin A chain protein.
          Length = 2628

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = -1

Query: 470 CRNQVYLPTDITQPPARRLRATAAGTIEGPELAAMPVRHHPHHSVRSTDCRI 315
           CR +   P  +       +   A    +GPE+    V H P   VR+  CRI
Sbjct: 17  CRQRGLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPVRNPQCRI 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,558,801
Number of Sequences: 237096
Number of extensions: 1703874
Number of successful extensions: 4550
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4545
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)