Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321B09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 73 9e-14
Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 31 0.50
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 31 0.50
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.0
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 2.0
U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical p... 28 3.5
U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin ... 28 3.5
AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical ... 28 3.5
AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 27 6.2
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 27 6.2
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 27 8.1
AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical ... 27 8.1
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 73.3 bits (172), Expect = 9e-14
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +2
Query: 242 RSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT-LQESHLWPQYV 418
R+ PTL+ERL+ P F YYG K + LQ+S +WP YV
Sbjct: 50 RTGPTLKERLLGPTTGKPFVYGTYALAGASVFGVGALMYYGLVSKEQSILQKSAIWPSYV 109
Query: 419 KERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNL 520
+ERI TTY Y+AGSL LTA S VA R+ A++ L
Sbjct: 110 RERISTTYAYLAGSLALTAVSGVAASRSAAIMRL 143
>Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical
protein T10G3.8 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 176 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 280
+ VP+N V +N + +PR RV TR P+ +L P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 64 KKFKSC*NKRIINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG- 234
+ K C + IN V N+ ++L N E ++T FC CG CT S KG
Sbjct: 1254 ESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGY 1312
Query: 235 RYTLTTHTSGE 267
+H SGE
Sbjct: 1313 MCQCDSHFSGE 1323
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 64 KKFKSC*NKRIINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG- 234
+ K C + IN V N+ ++L N E ++T FC CG CT S KG
Sbjct: 1254 ESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGY 1312
Query: 235 RYTLTTHTSGE 267
+H SGE
Sbjct: 1313 MCQCDSHFSGE 1323
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 118 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 234
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 118 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 234
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical
protein C18C4.9 protein.
Length = 389
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 436 CFYTFFHILWPKVRFLKSTWFYPR 365
C + F H+ P++ F++ TW + R
Sbjct: 190 CIHQFLHLTQPQILFVRKTWNHAR 213
>U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin
protein 6 protein.
Length = 407
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 334 SWTSCSVLLWLWGKTRYSSGISP 402
SW S SVL WL G T + ISP
Sbjct: 219 SWPSTSVLTWLDGSTSDYNNISP 241
>AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.10 protein.
Length = 250
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +1
Query: 109 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 288
+TN L + CN +C ++ CG+ C T+ G T+T+ GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211
Query: 289 KCIQLGQGCISWS 327
C +WS
Sbjct: 212 YIADSSSNCAAWS 224
>AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 373 KTRYSSGISPLATICERTYKNNIWIHRGFFGADCW*CSCCFQN 501
KT+++ P ER K++I +HR C C C+Q+
Sbjct: 166 KTKHNCPECPKKYTSERRLKHHIVVHRNPDAYKCQKCGYCYQS 208
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +1
Query: 211 CTRTSNKGRYTLTTHTSGETHGTCWTKCIQLGQGCISWSLCSWTSCSVLLWLWGK 375
C RT + T T+ + T GTC + C SW+ + C VL L K
Sbjct: 9 CQRTCGRCPSTTTSGSVTVTSGTCTSYIADSSSNCASWARTT-RFCVVLSLLLNK 62
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -1
Query: 422 LSHIVAKGEIPEEYLVLPQSHSSTEQLVQLQR 327
L H+ + +IP E+++ Q HS + V+L++
Sbjct: 28 LKHVQKRHDIPLEFIMNSQEHSDIRRSVRLEK 59
>AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical
protein T05B4.12 protein.
Length = 244
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 109 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGE-THGTCW 285
+TN L + CN ++C QK C GR TT +SG T GTC
Sbjct: 158 VTNCGNDLSI-CNTVGMQTFVNQYC------QKTC------GRCPSTTASSGSVTSGTCT 204
Query: 286 TKCIQLGQGCISWS 327
+ C SW+
Sbjct: 205 SYAADSSTSCTSWA 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,817,630
Number of Sequences: 27780
Number of extensions: 246808
Number of successful extensions: 797
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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