Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321B08f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1012 - 30104401-30104955,30105066-30106841                       30   1.3  
04_04_1005 - 30043698-30044252,30044363-30046138                       30   1.3  
03_02_0504 - 8976973-8979414                                           30   1.3  
01_01_0926 + 7324145-7324561,7324773-7324778,7325255-7325311,732...    29   2.3  
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918...    29   3.0  
04_03_0241 - 13243938-13244453,13244538-13246334                       28   5.2  
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009     28   5.2  
03_02_0139 - 5844107-5844278,5844413-5844521,5844630-5844732,584...    27   6.9  

>04_04_1012 - 30104401-30104955,30105066-30106841
          Length = 776

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 295 STDEQELWAWTVPYSTRVSIFWLLYKKELKEVSLRKLPTTE 417
           +T   +LWAWT   ST     WL + K  K+ +L  L   E
Sbjct: 165 NTRSIDLWAWTANPSTIPKRMWLGFTKRAKDPNLAPLFAVE 205


>04_04_1005 - 30043698-30044252,30044363-30046138
          Length = 776

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 295 STDEQELWAWTVPYSTRVSIFWLLYKKELKEVSLRKLPTTE 417
           +T   +LWAWT   ST     WL + K  K+ +L  L   E
Sbjct: 165 NTRSIDLWAWTANPSTIPKRMWLGFTKRAKDPNLAPLFAVE 205


>03_02_0504 - 8976973-8979414
          Length = 813

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 295 STDEQELWAWTVPYSTRVSIFWLLYKKELKEVSLRKLPTTE 417
           +T   +LWAWT   ST     WL + K  K+ +L  L   E
Sbjct: 165 NTRSIDLWAWTANPSTIPKRMWLGFTKRAKDSNLAPLFAVE 205


>01_01_0926 +
           7324145-7324561,7324773-7324778,7325255-7325311,
           7325572-7325661,7325938-7325982,7326088-7326142,
           7326245-7326288,7326401-7326790,7327276-7327541,
           7328292-7328430,7328514-7328564,7329158-7329642,
           7329724-7330327,7330717-7331025
          Length = 985

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -2

Query: 325 STPKALVRRSSRVTETALAGTSSVSPDADCTRALVYQ 215
           +TP  L+  S R+  ++ + + S SP A C RAL Y+
Sbjct: 21  ATPAPLLHLSRRLFSSSSSPSPSPSPRAACLRALAYR 57


>02_04_0366 -
           22389591-22390527,22391296-22391429,22391762-22391816,
           22392364-22393225,22393342-22393459,22393647-22393737,
           22394627-22394670
          Length = 746

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -3

Query: 168 DVREFKIEI*FLNNFK---ELGSLLHLLYLIFERCDLGSGWG 52
           D RE +  + F N F     LGSL  +  L++ + ++G GWG
Sbjct: 259 DPREERAMVFFFNRFYFCISLGSLFAVTVLVYVQDNVGRGWG 300


>04_03_0241 - 13243938-13244453,13244538-13246334
          Length = 770

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 313 LWAWTVPYSTRVSIFWLLYKKELKE 387
           LWAWTV  ST     WL + K  K+
Sbjct: 171 LWAWTVNPSTIPKRMWLGFTKRAKD 195


>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
          Length = 768

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +1

Query: 295 STDEQELWAWTVPYSTRVSIFWLLYKKELKEVSLRKLPTTE 417
           +T   +LWAWT   ST     WL +    K+  L  L   E
Sbjct: 165 NTRSIDLWAWTANPSTIPKRMWLGFTNRAKDQQLAPLLVAE 205


>03_02_0139 -
           5844107-5844278,5844413-5844521,5844630-5844732,
           5844834-5844865,5845211-5845434,5845774-5845889,
           5845997-5846252,5846720-5846807,5846891-5846962,
           5847096-5847171,5847302-5847360,5848202-5848268,
           5848760-5848825,5850466-5850657
          Length = 543

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 316 WAWTVPYSTRVSIFWLLYKKELK 384
           W W   YS+R  ++++ YK  LK
Sbjct: 505 WEWAAGYSSRFGLYFVDYKDNLK 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,015,664
Number of Sequences: 37544
Number of extensions: 246829
Number of successful extensions: 590
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)