BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321B07f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC... 31 1.3
AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB... 31 1.3
AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA... 31 1.3
AY071118-1|AAL48740.1| 560|Drosophila melanogaster RE16970p pro... 28 6.7
AE014297-553|AAN13359.1| 505|Drosophila melanogaster CG1091-PA,... 28 6.7
AE014297-552|AAF54068.3| 560|Drosophila melanogaster CG1091-PB,... 28 6.7
>AE014134-1416|ABI31300.1| 2682|Drosophila melanogaster CG8486-PC,
isoform C protein.
Length = 2682
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 LFWHQVCGLFLIFFKNLRTIRSHFRCYVI 95
L W +C F+IF LR +SH+ C++I
Sbjct: 1350 LLWDTICFAFIIF--QLRIFKSHYFCHII 1376
>AE014134-1415|AAN11153.1| 2720|Drosophila melanogaster CG8486-PB,
isoform B protein.
Length = 2720
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 LFWHQVCGLFLIFFKNLRTIRSHFRCYVI 95
L W +C F+IF LR +SH+ C++I
Sbjct: 1350 LLWDTICFAFIIF--QLRIFKSHYFCHII 1376
>AE014134-1414|AAF52611.1| 2771|Drosophila melanogaster CG8486-PA,
isoform A protein.
Length = 2771
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 LFWHQVCGLFLIFFKNLRTIRSHFRCYVI 95
L W +C F+IF LR +SH+ C++I
Sbjct: 1350 LLWDTICFAFIIF--QLRIFKSHYFCHII 1376
>AY071118-1|AAL48740.1| 560|Drosophila melanogaster RE16970p
protein.
Length = 560
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 107 INLDYNVTSEVASYGTQVFKKNQEQTTYLM 18
I L++NVT V YG Q F +QT L+
Sbjct: 518 IQLNHNVTKAVTKYGLQTFVDYCQQTAELL 547
>AE014297-553|AAN13359.1| 505|Drosophila melanogaster CG1091-PA,
isoform A protein.
Length = 505
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 107 INLDYNVTSEVASYGTQVFKKNQEQTTYLM 18
I L++NVT V YG Q F +QT L+
Sbjct: 463 IQLNHNVTKAVTKYGLQTFVDYCQQTAELL 492
>AE014297-552|AAF54068.3| 560|Drosophila melanogaster CG1091-PB,
isoform B protein.
Length = 560
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 107 INLDYNVTSEVASYGTQVFKKNQEQTTYLM 18
I L++NVT V YG Q F +QT L+
Sbjct: 518 IQLNHNVTKAVTKYGLQTFVDYCQQTAELL 547
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,319,910
Number of Sequences: 53049
Number of extensions: 350535
Number of successful extensions: 469
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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