BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321A12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-141|AAF47417.1| 604|Drosophila melanogaster CG13886-PA... 44 2e-04
AY089285-1|AAL90023.1| 579|Drosophila melanogaster AT08308p pro... 33 0.18
AE014296-3576|AAF51747.2| 579|Drosophila melanogaster CG7634-PA... 33 0.18
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P... 33 0.31
AE014298-2123|AAF48439.1| 689|Drosophila melanogaster CG6211-PA... 30 2.2
AY061607-1|AAL29155.1| 441|Drosophila melanogaster SD07279p pro... 29 5.1
>AE014296-141|AAF47417.1| 604|Drosophila melanogaster CG13886-PA
protein.
Length = 604
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 72 GTKMESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK---LTTSTLALEA 242
G K P + AH RR+E ++NHRY+EA++ +++ + DA K L S L+
Sbjct: 389 GFKWNYLPKSKAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPKSKEVLDT 448
Query: 243 ITLQHSYHLKQKDLIK 290
+TL L+Q ++ K
Sbjct: 449 LTLDFQRKLRQIEMRK 464
>AY089285-1|AAL90023.1| 579|Drosophila melanogaster AT08308p
protein.
Length = 579
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 90 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 212
+P+ ++ H+ AE HLK+HR+DE C SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489
>AE014296-3576|AAF51747.2| 579|Drosophila melanogaster CG7634-PA
protein.
Length = 579
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 90 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 212
+P+ ++ H+ AE HLK+HR+DE C SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489
>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
protein.
Length = 1025
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/55 (21%), Positives = 31/55 (56%)
Frame = +3
Query: 141 KNHRYDEAMQCHQSAAELLVDAMKLTTSTLALEAITLQHSYHLKQKDLIKYKKEQ 305
++H YD+A+ H+S ++ ++T +T ++ T+ H + +K + Y+ ++
Sbjct: 387 RHHPYDDALTIHKSGIAYQINVTEVTENTKDIQVKTIDHIHVIKLSTKLLYELQR 441
>AE014298-2123|AAF48439.1| 689|Drosophila melanogaster CG6211-PA
protein.
Length = 689
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 111 QQHRRAEAHLKNHRYDEAMQCHQSAAELLVD 203
+Q +R E N R+DE MQ HQ +EL V+
Sbjct: 621 EQSQRYELPHANQRFDEIMQEHQKQSELYVN 651
>AY061607-1|AAL29155.1| 441|Drosophila melanogaster SD07279p
protein.
Length = 441
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 333 TIKRLGKEPISNLQGHDYAQLQIAIYRAIN 422
+++R G+ P +++Q HD AQ+ + + AIN
Sbjct: 104 SLQRSGQAPKNHIQSHDPAQMSLLKFLAIN 133
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,562,328
Number of Sequences: 53049
Number of extensions: 305694
Number of successful extensions: 1170
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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