Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321A05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74475-4|CAD01086.1|  185|Caenorhabditis elegans Hypothetical pr...    46   2e-05
AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical ...    33   0.12 
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    30   1.2  
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z81500-1|CAB04093.1|  390|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49128-2|CAA88959.1|  848|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF386744-1|AAL57289.1|  384|Caenorhabditis elegans PAF-1 protein.      28   4.7  
AF039716-8|AAB96738.1|  384|Caenorhabditis elegans Paf-acetylhyd...    28   4.7  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z74475-4|CAD01086.1|  185|Caenorhabditis elegans Hypothetical
           protein R04F11.5 protein.
          Length = 185

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 28/113 (24%), Positives = 52/113 (46%)
 Frame = +3

Query: 150 DYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNPTECDFKDNLKIINN 329
           +Y+K +  DY  + ++     +D P+KA    +G+       + NPTE +  D L     
Sbjct: 19  EYFKRMGNDYATVARETVQGCKDRPVKAGVVFSGLGFLTYAYQTNPTELEMYDYLCERRQ 78

Query: 330 EVGLVSEECLNPKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLY 488
           ++ LV     NP   + L   D   +Q  +HY +L   S++  S+ ++   +Y
Sbjct: 79  KLVLVPNSEHNPATTKELTARDFLISQNRLHYYNLWFFSLLVASDYNDKLRIY 131


>AF067940-4|AAC19201.1|  487|Caenorhabditis elegans Hypothetical
           protein F36F12.2 protein.
          Length = 487

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 363 PKAVEHLRFLDTCYNQEVIHYRSLGILSVMYTSELSNSCDLYRAH---CTYTKPTY 521
           PK   +   +  CYNQ   H R  G+LS   T   +  C+L +     CT++  TY
Sbjct: 405 PKDDFYTNIVFQCYNQSFYHIRDAGLLSAESTCVNAFDCELSQREAMPCTHSDATY 460


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 363 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 500
           P A+ +L F  T    ++EVIH+  L +LSV+ + E      L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 363 PKAVEHLRFLDTCY--NQEVIHYRSLGILSVMYTSELSNSCDLYRAHC 500
           P A+ +L F  T    ++EVIH+  L +LSV+ + E      L RA C
Sbjct: 328 PTALFYLLFSPTTIQDDEEVIHWHRLSLLSVVTSEEAEELKPLSRAMC 375


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
           protein B0511.12 protein.
          Length = 1634

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 254 DASCPLHGFHWIILYITP 201
           DAS P+HGF+W+  Y  P
Sbjct: 249 DASSPIHGFNWVASYNRP 266


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -2

Query: 151 SAHFSIIVPLNFSGNFTLVLIFLTVPDTL*ILRNIFVVFIYYEEIPNVI 5
           + HFS+++P    GN   VL  L   + +  +       IY +++PN +
Sbjct: 79  NVHFSLVIPAASIGNMRSVLTLLIALERVIAIYFPIFFHIYRQKLPNFV 127


>Z81500-1|CAB04093.1|  390|Caenorhabditis elegans Hypothetical
           protein F11D11.1 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
 Frame = +3

Query: 141 KWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP--TECDFKDNL 314
           KW   +K     Y   +   R   +D P    KWT G    Y    NN   TE    DN 
Sbjct: 193 KWVQEYKISNKTYPAWIGGARDCPEDSPCTIFKWTDGYTNLYDALNNNAQLTERTGFDNC 252

Query: 315 KII-----NNEVGLVSEECLNPKAVEHLRFL 392
             I     N +  + S+ C+ P+A    R +
Sbjct: 253 LAILPPRNNTDAIIFSQPCV-PEAYCQFRMI 282


>Z49128-2|CAA88959.1|  848|Caenorhabditis elegans Hypothetical
           protein M03C11.2 protein.
          Length = 848

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 27/97 (27%), Positives = 42/97 (43%)
 Frame = +3

Query: 108 FPEKFKGTIIEKWADYWKNLFIDYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSRNNP 287
           F +K K   I K  +  K +F + RQ      SD+ D   +A K + G I F ++     
Sbjct: 674 FQKKMKEFGILKRIEEKKAVFTESRQPT----SDVWDRFSRAAKTSKGAILFAVVGGKMS 729

Query: 288 TECDFKDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 398
              +F D L      +GL      + +  E ++FLDT
Sbjct: 730 EGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDT 766


>AF386744-1|AAL57289.1|  384|Caenorhabditis elegans PAF-1 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 303 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 398
           KD  KI N +VG  +EEC   KAV+ L  LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203


>AF039716-8|AAB96738.1|  384|Caenorhabditis elegans
           Paf-acetylhydrolase protein 1 protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 303 KDNLKIINNEVGLVSEECLNPKAVEHLRFLDT 398
           KD  KI N +VG  +EEC   KAV+ L  LD+
Sbjct: 174 KDQFKIRNEQVGKRAEEC--AKAVKILEQLDS 203


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 174 DYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSR-NNPTE 293
           D + +L  L   +       ++W+  II+FYL+ R NN TE
Sbjct: 686 DIQGLLDQLHEIVILQNTAVLQWSDSIISFYLVERLNNITE 726


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +3

Query: 174 DYRQMLQDLRSDIQDDPMKAMKWTTGIITFYLLSR-NNPTE 293
           D + +L  L   +       ++W+  II+FYL+ R NN TE
Sbjct: 686 DIQGLLDQLHEIVILQNTAVLQWSDSIISFYLVERLNNITE 726


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,505,639
Number of Sequences: 27780
Number of extensions: 263504
Number of successful extensions: 680
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)