Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321A04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92396-1|CAA63133.1| 220|Homo sapiens ORF protein. 182 9e-46
BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1 pr... 182 9e-46
AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like prot... 182 9e-46
AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1 pr... 182 9e-46
AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1 va... 180 4e-45
AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAM... 79 2e-21
>X92396-1|CAA63133.1| 220|Homo sapiens ORF protein.
Length = 220
Score = 182 bits (442), Expect = 9e-46
Identities = 82/140 (58%), Positives = 104/140 (74%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFHYIAENKL 281
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++ LTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 282 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 461
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 462 RDLDNISRVHGELDELKNIM 521
+ LD + ++DELK IM
Sbjct: 121 KGLDKVMETQAQVDELKGIM 140
>BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1
protein.
Length = 220
Score = 182 bits (442), Expect = 9e-46
Identities = 82/140 (58%), Positives = 104/140 (74%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFHYIAENKL 281
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++ LTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 282 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 461
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 462 RDLDNISRVHGELDELKNIM 521
+ LD + ++DELK IM
Sbjct: 121 KGLDKVMETQAQVDELKGIM 140
>AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like protein
1B protein.
Length = 260
Score = 182 bits (442), Expect = 9e-46
Identities = 82/140 (58%), Positives = 104/140 (74%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFHYIAENKL 281
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++ LTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 282 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 461
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 462 RDLDNISRVHGELDELKNIM 521
+ LD + ++DELK IM
Sbjct: 121 KGLDKVMETQAQVDELKGIM 140
>AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1
protein protein.
Length = 220
Score = 182 bits (442), Expect = 9e-46
Identities = 82/140 (58%), Positives = 104/140 (74%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFHYIAENKL 281
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++ LTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 282 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 461
VY CITDD F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 462 RDLDNISRVHGELDELKNIM 521
+ LD + ++DELK IM
Sbjct: 121 KGLDKVMETQAQVDELKGIM 140
>AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1
variant protein.
Length = 220
Score = 180 bits (437), Expect = 4e-45
Identities = 82/140 (58%), Positives = 103/140 (73%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFHYIAENKL 281
M ILF++VARGT +LAK+A C GNF EV EQIL+KIP ++ LTYSHGNYLFHYI ++++
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRI 60
Query: 282 VYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSES 461
VY CITDD F+RSRAF FLNEIK+R PYAMNSEF VLA ++KH+SE+
Sbjct: 61 VYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAPPYAMNSEFSSVLAAQLKHHSEN 120
Query: 462 RDLDNISRVHGELDELKNIM 521
+ LD + ++DELK IM
Sbjct: 121 KGLDKVMETQAQVDELKGIM 140
>AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAMP
(Ti-VAMP) protein.
Length = 179
Score = 79.0 bits (186), Expect(2) = 2e-21
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +3
Query: 303 DKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRDLDNIS 482
+ F+RSRAF FLNEIK+R +PYAMNSEF VLA ++KH+SE++ LD +
Sbjct: 27 EDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVM 86
Query: 483 RVHGELDELKNIM 521
++DELK IM
Sbjct: 87 ETQAQVDELKGIM 99
Score = 42.7 bits (96), Expect(2) = 2e-21
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 102 MPILFSIVARGTVVLAKYATCQGNFTEVAEQ 194
M ILF++VARGT +LAK+A C GNF E E+
Sbjct: 1 MAILFAVVARGTTILAKHAWCGGNFLEDFER 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,174,271
Number of Sequences: 237096
Number of extensions: 1412766
Number of successful extensions: 2498
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2498
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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