Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS321A04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z68107-2|CAE17826.1|  170|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 156  ATCQGNFTEVAEQILSKIPPHDDXLTYSHGNYLFH 260
            ATC G+ T V  Q +  I P +  +TYS G+ + H
Sbjct: 1175 ATCSGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLH 1209


>Z50863-6|CAA90739.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 GTVVLAKYATCQGNFTEVAEQIL 200
           G +V AK+  CQGN T    +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245


>Z50858-7|CAA90725.1|  250|Caenorhabditis elegans Hypothetical
           protein F44A6.5 protein.
          Length = 250

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 GTVVLAKYATCQGNFTEVAEQIL 200
           G +V AK+  CQGN T    +IL
Sbjct: 223 GAMVFAKFNRCQGNITRDVNEIL 245


>AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical
           protein C18E3.3 protein.
          Length = 893

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +1

Query: 295 SLTINSNVRERSYFLMR*KEDSLQHLLTPHRQQYLTP*TVNLVGFLPLR 441
           SL   +NV ER+ F M   ++ L+HL TP   +Y T   ++L  F PL+
Sbjct: 603 SLKATNNVPERAPFTMYSTKNQLEHLSTP---EYPTARRISL-QFKPLK 647


>Z69663-4|CAA93508.1|  287|Caenorhabditis elegans Hypothetical
           protein K02B9.3a protein.
          Length = 287

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +3

Query: 63  NIVFFVSFTRLFTMPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDXLT--Y 236
           N +F+V     +   I   I+   +VVL+K+    GNF E  E+++     H   L    
Sbjct: 33  NGIFYVPHLVRYFFLINTLIITINSVVLSKFGIICGNF-EWFEEVVFAPNFHSSALNILL 91

Query: 237 SHGNYLFHYIAENKLV 284
              N+LFH I+  +++
Sbjct: 92  RVSNFLFHAISTLQII 107


>Z68107-2|CAE17826.1|  170|Caenorhabditis elegans Hypothetical
           protein F48C5.2 protein.
          Length = 170

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 473 VQVSRFTVMFHLSGKNPTKFTVHGVRYCCL-CGVSKCCSESSFYLIKK 333
           +Q   F     L+G    +F    +  CC+ C  S CC   ++  +KK
Sbjct: 19  IQSCLFLPNVMLNGGTVDEFQTDDITQCCVQCSSSSCCIAYTYDTVKK 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,762,757
Number of Sequences: 27780
Number of extensions: 232646
Number of successful extensions: 646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)