Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS321A03f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 0.61
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 0.61
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 0.61
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 0.61
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 0.61
X63717-1|CAA45250.1| 335|Homo sapiens APO-1 cell surface antige... 32 1.4
M67454-1|AAA63174.1| 335|Homo sapiens Fas antigen protein. 32 1.4
CR450307-1|CAG29303.1| 335|Homo sapiens TNFRSF6 protein. 32 1.4
BC012479-1|AAH12479.1| 335|Homo sapiens Fas (TNF receptor super... 32 1.4
AY450925-1|AAR08906.1| 335|Homo sapiens tumor necrosis factor r... 32 1.4
AL157394-10|CAI13872.1| 335|Homo sapiens Fas (TNF receptor supe... 32 1.4
AB209361-1|BAD92598.1| 362|Homo sapiens tumor necrosis factor r... 32 1.4
M14123-1|AAA88030.1| 283|Homo sapiens gag 1 protein protein. 31 3.2
AL137186-16|CAI41084.1| 175|Homo sapiens interleukin 15 recepto... 31 3.2
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 31 3.2
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 31 3.2
AL157394-8|CAI13870.1| 220|Homo sapiens Fas (TNF receptor super... 30 4.3
BC141813-1|AAI41814.1| 440|Homo sapiens PITPNM2 protein protein. 29 9.9
BC127255-1|AAI27256.1| 221|Homo sapiens LOC550631 protein protein. 29 9.9
BC119799-1|AAI19800.1| 221|Homo sapiens LOC550631 protein protein. 29 9.9
BC092419-1|AAH92419.1| 701|Homo sapiens hypothetical LOC550631 ... 29 9.9
AF334585-1|AAK01445.1| 1349|Homo sapiens NIR3 protein. 29 9.9
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 29 9.9
AF164610-1|AAD51792.1| 494|Homo sapiens Gag protein protein. 29 9.9
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 29 9.9
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 29 9.9
AB040890-1|BAA95981.2| 1359|Homo sapiens KIAA1457 protein protein. 29 9.9
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 197 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 376
TP +T +S SRTP+ R R + + PV ++ ++ +SP R R
Sbjct: 1927 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 1986
Query: 377 HPTTSLQPRRAINP 418
P T + R +P
Sbjct: 1987 SPVTRRRSRSRTSP 2000
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 TRCRLPMMTTPIMTSNQSASRTP--SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 343
TR R T P+ T +S SRTP + R +R R + I + SPV ++ ++ +S
Sbjct: 1942 TRRRSRSRTPPV-TRRRSRSRTPPVTRRRSRS-RTSPITRRRSRSRTSPVTRRRSRSRTS 1999
Query: 344 PQLHSIIRPRRHPTTSLQPRRAINP 418
P R R P T + R P
Sbjct: 2000 PVTRRRSRSRTSPVTRRRSRSRTPP 2024
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 197 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 376
TP +T +S SRTP+ R R + + PV ++ ++ +SP R R
Sbjct: 959 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 1018
Query: 377 HPTTSLQPRRAINP 418
P T + R +P
Sbjct: 1019 SPVTRRRSRSRTSP 1032
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 TRCRLPMMTTPIMTSNQSASRTP--SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 343
TR R T P+ T +S SRTP + R +R R + I + SPV ++ ++ +S
Sbjct: 974 TRRRSRSRTPPV-TRRRSRSRTPPVTRRRSRS-RTSPITRRRSRSRTSPVTRRRSRSRTS 1031
Query: 344 PQLHSIIRPRRHPTTSLQPRRAINP 418
P R R P T + R P
Sbjct: 1032 PVTRRRSRSRTSPVTRRRSRSRTPP 1056
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 197 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 376
TP +T +S SRTP+ R R + + PV ++ ++ +SP R R
Sbjct: 1927 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 1986
Query: 377 HPTTSLQPRRAINP 418
P T + R +P
Sbjct: 1987 SPVTRRRSRSRTSP 2000
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 TRCRLPMMTTPIMTSNQSASRTP--SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 343
TR R T P+ T +S SRTP + R +R R + I + SPV ++ ++ +S
Sbjct: 1942 TRRRSRSRTPPV-TRRRSRSRTPPVTRRRSRS-RTSPITRRRSRSRTSPVTRRRSRSRTS 1999
Query: 344 PQLHSIIRPRRHPTTSLQPRRAINP 418
P R R P T + R P
Sbjct: 2000 PVTRRRSRSRTSPVTRRRSRSRTPP 2024
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 197 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 376
TP +T +S SRTP+ R R + + PV ++ ++ +SP R R
Sbjct: 450 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 509
Query: 377 HPTTSLQPRRAINP 418
P T + R +P
Sbjct: 510 SPVTRRRSRSRTSP 523
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 TRCRLPMMTTPIMTSNQSASRTP--SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 343
TR R T P+ T +S SRTP + R +R R + I + SPV ++ ++ +S
Sbjct: 465 TRRRSRSRTPPV-TRRRSRSRTPPVTRRRSRS-RTSPITRRRSRSRTSPVTRRRSRSRTS 522
Query: 344 PQLHSIIRPRRHPTTSLQPRRAINP 418
P R R P T + R P
Sbjct: 523 PVTRRRSRSRTSPVTRRRSRSRTPP 547
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.1 bits (72), Expect = 0.61
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 197 TPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRPRR 376
TP +T +S SRTP+ R R + + PV ++ ++ +SP R R
Sbjct: 1975 TPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRT 2034
Query: 377 HPTTSLQPRRAINP 418
P T + R +P
Sbjct: 2035 SPVTRRRSRSRTSP 2048
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 170 TRCRLPMMTTPIMTSNQSASRTP--SNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSS 343
TR R T P+ T +S SRTP + R +R R + I + SPV ++ ++ +S
Sbjct: 1990 TRRRSRSRTPPV-TRRRSRSRTPPVTRRRSRS-RTSPITRRRSRSRTSPVTRRRSRSRTS 2047
Query: 344 PQLHSIIRPRRHPTTSLQPRRAINP 418
P R R P T + R P
Sbjct: 2048 PVTRRRSRSRTSPVTRRRSRSRTPP 2072
>X63717-1|CAA45250.1| 335|Homo sapiens APO-1 cell surface antigen
precursor protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>M67454-1|AAA63174.1| 335|Homo sapiens Fas antigen protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>CR450307-1|CAG29303.1| 335|Homo sapiens TNFRSF6 protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>BC012479-1|AAH12479.1| 335|Homo sapiens Fas (TNF receptor
superfamily, member 6) protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>AY450925-1|AAR08906.1| 335|Homo sapiens tumor necrosis factor
receptor superfamily, member 6 protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>AL157394-10|CAI13872.1| 335|Homo sapiens Fas (TNF receptor
superfamily, member 6) protein.
Length = 335
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 194 EVQKTCRKHRKENQGSHESPTLNPET 219
>AB209361-1|BAD92598.1| 362|Homo sapiens tumor necrosis factor
receptor superfamily, member 6 isoform 1 precursor
varian protein.
Length = 362
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 162 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 220
Query: 311 VMQQSTKRLSSPQLHSIIRPRRHPTT 388
+Q++ ++ S P +P T
Sbjct: 221 EVQKTCRKHRKENQGSHESPTLNPET 246
>M14123-1|AAA88030.1| 283|Homo sapiens gag 1 protein protein.
Length = 283
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR SL+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETESLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AL137186-16|CAI41084.1| 175|Homo sapiens interleukin 15 receptor,
alpha protein.
Length = 175
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 140 TEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWRLATIPSLNLKWSRSP 310
T C + TTP + + A+ +PS+ NT A +P L S+SP
Sbjct: 62 TSSLTECVLNKATNVAHWTTPSLKCIKPAASSPSSNNTAATTAAIVPGSQLMPSKSP 118
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR SL+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETESLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR SL+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETESLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AL157394-8|CAI13870.1| 220|Homo sapiens Fas (TNF receptor
superfamily, member 6) protein.
Length = 220
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 134 CRTEICVNCAAGTRCRLPMMTTPIMTSNQSASRTPSNRNTRGWR-LATIPSLNLKWSRSP 310
C + +C +C T+C ++ +TSN + + +R+ GW L +P + W +
Sbjct: 135 CNSTVCEHCDPCTKCEHGIIKECTLTSN-TKCKEEGSRSNLGWLCLLLLPIPLIVWVKRK 193
Query: 311 VMQQSTKR 334
+Q++ ++
Sbjct: 194 EVQKTCRK 201
>BC141813-1|AAI41814.1| 440|Homo sapiens PITPNM2 protein protein.
Length = 440
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 212 SNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSI 361
S+Q++ P ++ G L L +WS S +S+KR +SP HSI
Sbjct: 277 SDQTSGEPPEPSSSNGEPLVG-RGLKKQWSTSSKSSRSSKRGASPSRHSI 325
>BC127255-1|AAI27256.1| 221|Homo sapiens LOC550631 protein protein.
Length = 221
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 340 QPSTSFDNPPSTSSDNQPATSSGNQPSS 423
QP TS P TS QP TS QP S
Sbjct: 145 QPCTSPPRQPCTSPPRQPCTSPSRQPCS 172
>BC119799-1|AAI19800.1| 221|Homo sapiens LOC550631 protein protein.
Length = 221
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 340 QPSTSFDNPPSTSSDNQPATSSGNQPSS 423
QP TS P TS QP TS QP S
Sbjct: 145 QPCTSPPRQPCTSPPRQPCTSPSRQPCS 172
>BC092419-1|AAH92419.1| 701|Homo sapiens hypothetical LOC550631
protein.
Length = 701
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 340 QPSTSFDNPPSTSSDNQPATSSGNQPSS 423
QP TS P TS QP TS QP S
Sbjct: 625 QPCTSPPRQPCTSPPRQPCTSPSRQPCS 652
>AF334585-1|AAK01445.1| 1349|Homo sapiens NIR3 protein.
Length = 1349
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 212 SNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSI 361
S+Q++ P ++ G L L +WS S +S+KR +SP HSI
Sbjct: 277 SDQTSGEPPEPSSSNGEPLVG-RGLKKQWSTSSKSSRSSKRGASPSRHSI 325
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR L+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETEGLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AF164610-1|AAD51792.1| 494|Homo sapiens Gag protein protein.
Length = 494
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR L+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETEGLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR L+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETEGLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 242 NRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSIIRP 370
N NTR L+ ++ PVM QST+ + QL +I P
Sbjct: 116 NENTRKKSQKETEGLHCEYVAEPVMAQSTQNVDYNQLQEVIYP 158
>AB040890-1|BAA95981.2| 1359|Homo sapiens KIAA1457 protein protein.
Length = 1359
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 212 SNQSASRTPSNRNTRGWRLATIPSLNLKWSRSPVMQQSTKRLSSPQLHSI 361
S+Q++ P ++ G L L +WS S +S+KR +SP HSI
Sbjct: 293 SDQTSGEPPEPSSSNGEPLVG-RGLKKQWSTSSKSSRSSKRGASPSRHSI 341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,781,725
Number of Sequences: 237096
Number of extensions: 1319770
Number of successful extensions: 3690
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3681
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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