Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320H10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80023-7|AAG24034.1|  145|Caenorhabditis elegans C-type lectin p...    33   0.16 
Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>U80023-7|AAG24034.1|  145|Caenorhabditis elegans C-type lectin
           protein 46 protein.
          Length = 145

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -1

Query: 290 FFICFILLQQSFVNCSLNFTGIFFLGNCSSLIM-PLMY 180
           FF+ F+LL  + ++C   FT I   G C  +I+ PL Y
Sbjct: 7   FFLSFLLLPAASMDCPTGFTSIATTGQCLKIIVAPLSY 44


>Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical
           protein T22H6.3 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 394 LKVVYC*LFGILTCIPLNTNAAYPRFNVRCEPDTIFLY 281
           L  VYC  FG+  CI L     Y R+   C PD +F +
Sbjct: 90  LIAVYCASFGM--CISLLALHFYYRYIAVCRPDKLFYF 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,635,188
Number of Sequences: 27780
Number of extensions: 168709
Number of successful extensions: 280
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)