Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320H09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14521-1|AAA64269.1|  360|Caenorhabditis elegans ppp-1 protein.        75   2e-14
AC006608-3|AAF39757.1|  404|Caenorhabditis elegans Pyrophosphory...    75   2e-14
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U41508-2|AAN39665.2|  552|Caenorhabditis elegans Set (trithorax/...    27   8.1  

>U14521-1|AAA64269.1|  360|Caenorhabditis elegans ppp-1 protein.
          Length = 360

 Score = 75.4 bits (177), Expect = 2e-14
 Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
 Frame = +3

Query: 159 EFQVVVLAAGKGSRMPDVGGSVSKCLLPVGPYPVLWYPLNMLEKIGFQDVMIVVLD---- 326
           E Q ++L +G G+RMP +   V KCLLPV   P+  YPL+ L + G  D+ I V +    
Sbjct: 3   EMQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIFVREVLQL 62

Query: 327 --EDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVISGDLITNI 500
             E +      LEK P  I+Y   +  ++ED+GTA+ LK+  ++I  D L++S D I++ 
Sbjct: 63  TLEKEVKKSKLLEKYPAHIEY---ICVNQEDFGTADLLKNHHSKITKDALIVSCDFISDA 119

Query: 501 NL 506
           +L
Sbjct: 120 SL 121


>AC006608-3|AAF39757.1|  404|Caenorhabditis elegans
           Pyrophosphorylase family protein 1 protein.
          Length = 404

 Score = 75.4 bits (177), Expect = 2e-14
 Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
 Frame = +3

Query: 159 EFQVVVLAAGKGSRMPDVGGSVSKCLLPVGPYPVLWYPLNMLEKIGFQDVMIVVLD---- 326
           E Q ++L +G G+RMP +   V KCLLPV   P+  YPL+ L + G  D+ I V +    
Sbjct: 3   EMQGILLCSGGGTRMPVLTRHVQKCLLPVVGVPMFLYPLSSLLRTGITDIKIFVREVLQL 62

Query: 327 --EDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARINTDLLVISGDLITNI 500
             E +      LEK P  I+Y   +  ++ED+GTA+ LK+  ++I  D L++S D I++ 
Sbjct: 63  TLEKEVKKSKLLEKYPAHIEY---ICVNQEDFGTADLLKNHHSKITKDALIVSCDFISDA 119

Query: 501 NL 506
           +L
Sbjct: 120 SL 121


>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
           protein ZK430.1 protein.
          Length = 1650

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 19/70 (27%), Positives = 28/70 (40%)
 Frame = -3

Query: 303 LEIQFFLAYLMDTIVLGTAQQVGDISKLILRHLAYGNLFQRPTRQLGILRFYAFSTASKD 124
           L I   +  + D  +L T  Q G I KLIL+    GN+F    +    +R      A + 
Sbjct: 371 LAIDVLIETIEDASIL-TGDQAGTILKLILQEGMDGNIFDNKKKLKSNIRAIGMRFAKQF 429

Query: 123 DVFEKQTNCK 94
           D    +   K
Sbjct: 430 DAIHAELKAK 439


>U41508-2|AAN39665.2|  552|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 20,
           isoform b protein.
          Length = 552

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +3

Query: 276 NMLEKIGFQDVMIVVLDEDKSNILNALEKCPLKIKYELIVIPSEEDWGTANSLKHVSARI 455
           N L KI + D+      E  S+ L  +++  LKI    + +  E++W T +  KH  A +
Sbjct: 68  NALNKIDYSDL------EQNSDDLIVIKRKKLKIHGTQLKMFKEQNWSTEHIYKHAKAAL 121


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,525,932
Number of Sequences: 27780
Number of extensions: 242176
Number of successful extensions: 538
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)