Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320H07f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0795 + 6994597-6994774,6994812-6995092,6997289-6997335,699... 31 0.42
03_03_0139 + 14769393-14769764,14770113-14770193,14770537-14770737 31 0.74
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 30 1.3
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 29 1.7
01_06_0217 - 27624588-27625817,27626203-27626484,27626582-27626692 29 1.7
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 29 1.7
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 29 3.0
07_01_0533 + 3942813-3943164,3943244-3943458 28 4.0
12_02_0445 - 19153580-19154269 28 5.2
06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849 28 5.2
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 28 5.2
01_06_1329 + 36354340-36354493,36355781-36355942,36356279-363564... 28 5.2
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 28 5.2
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 28 5.2
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 6.9
11_05_0076 - 18861629-18861862,18862421-18862532,18863001-18863146 27 9.1
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 27 9.1
08_02_0222 + 14446967-14448310 27 9.1
08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,452... 27 9.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 9.1
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 27 9.1
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 27 9.1
02_04_0188 - 20766093-20766449,20766526-20766624,20766717-207668... 27 9.1
02_02_0479 - 10775382-10775656,10776513-10777535,10777725-107784... 27 9.1
>11_01_0795 +
6994597-6994774,6994812-6995092,6997289-6997335,
6997550-6997772
Length = 242
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -3
Query: 117 FWVCCG-CNCPRCG-NTKAGPSGFQP 46
FWVCCG C+ P CG A SG P
Sbjct: 108 FWVCCGICSLPSCGAENPAAKSGGAP 133
>03_03_0139 + 14769393-14769764,14770113-14770193,14770537-14770737
Length = 217
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 146 PAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGP--YFTSDIKNLDENLK 319
P P++PS+ G+ G Q+QQ + + I Q+ Q P + TSD +
Sbjct: 99 PPPPLLPSHVAGVR-----YGHQQQQQQQQYAITCIKQQQQQQPSLFPTSDQSGC---FR 150
Query: 320 QNQYQIQQENYRTFQRQKQLE 382
Q Y++Q ++YR + Q Q+E
Sbjct: 151 QELYRMQLQDYRRRRAQPQME 171
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +2
Query: 218 QEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAK 397
++QQ Q N +Q Y + +NL+Q QYQ QQ+N + + + L+ Q +
Sbjct: 175 RQQQQYQQHQHHNQNHHQQQYQQQQQQYQHQNLQQ-QYQQQQQNLQQQYQHQNLQQQQQQ 233
Query: 398 NQANNLPA 421
Q P+
Sbjct: 234 QQQQQQPS 241
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 143 NPAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQ 322
N +PV + + + + Q QQ + I+ Q ++ ++ ++N Q
Sbjct: 133 NSVMPVPGEDSFPLQQNHHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQHHNQNHHQ 192
Query: 323 NQYQIQQENYR----TFQRQKQLEAAQAKNQANNLPAPQAPRQ 439
QYQ QQ+ Y+ Q Q+Q + Q + Q NL Q +Q
Sbjct: 193 QQYQQQQQQYQHQNLQQQYQQQQQNLQQQYQHQNLQQQQQQQQ 235
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 221 EQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQ 376
+QQ Q + Q Q + S + +N+ Q Q QQ+ + FQ+Q+Q
Sbjct: 1063 QQQQQLQQQLLQQQLLQQQQYLSQMPQQQQNMTQQQQLFQQQQQQLFQQQQQ 1114
>01_06_0217 - 27624588-27625817,27626203-27626484,27626582-27626692
Length = 540
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +2
Query: 140 RNPAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLK 319
++PA+PV SN Y + V V L TQ Q + + ++Q P ++ + + +
Sbjct: 201 QSPAVPVQSSNGYILQQLVPV-SLSTQPDQQQPSQAAVYYMQSQNPIKCTESEPSESAVH 259
Query: 320 QNQYQIQQENYRT----FQRQKQLEA--AQAKNQANNLPAPQAPRQ 439
Q QIQ R Q+ Q+ Q ++Q +LPA Q Q
Sbjct: 260 VIQSQIQNPEARVAVDLSQKSSQVTELYPQPQDQRLHLPAQQVESQ 305
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 194 VSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQN-QYQIQQENYRTFQRQ 370
+ Q + +EQQP S + QE + I+ L+++ Q Q QQ++ + Q+Q
Sbjct: 93 IETQSIKAREQQP----SQLQQQEAHSQQSSQQIQMQQLLLQRHAQQQQQQQSQQQPQQQ 148
Query: 371 KQLEAAQAKNQANNLP 418
++ + Q ++++++LP
Sbjct: 149 RRQQKQQQRSESSHLP 164
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 28.7 bits (61), Expect = 3.0
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Frame = +2
Query: 137 PRNPAIPVIPSNEYGIPNDVSVQGLPTQEQQ-------PIFQTSPINGQENQGPYFTSDI 295
PR P P PS + +P VQ PT + P QTSP Q + T D
Sbjct: 592 PRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQ-SALLISTYDP 650
Query: 296 KNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPA 421
K +D++ ++ + +R +++K+L + +Q + L A
Sbjct: 651 KEIDKDKEKFMFSA----FRNSEKRKELANVLSDSQKSVLAA 688
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 48 AGNLKA-QPSCCRNEDSCSHSKPKTICHLLTQGIQPFR*YL--ATSMEYPMTCQSK 206
+GN A +PSCC S SKP +C +L G + ++E P C K
Sbjct: 54 SGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINNTRALELPAACNVK 109
>12_02_0445 - 19153580-19154269
Length = 229
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +2
Query: 125 PPFDP---RNPAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSP 250
PPF P R+PA P + E G P D T + TSP
Sbjct: 29 PPFPPCPARSPAAPKLSRRERGAPRDGPAGAWCTTRRPGALSTSP 73
>06_03_0953 - 26277946-26278800,26280177-26280676,26280735-26280849
Length = 489
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/38 (23%), Positives = 19/38 (50%)
Frame = +2
Query: 206 GLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLK 319
GL T+E + P+ +N+G Y +++ D ++
Sbjct: 406 GLSTEEDETCHYEIPVKNSKNEGTYLATEVDQSDSEIE 443
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1
Query: 457 CATDFDHAC*EDHRSSRHPS 516
C TD HA E H SSRHPS
Sbjct: 1039 CLTDEIHANIEMHASSRHPS 1058
>01_06_1329 +
36354340-36354493,36355781-36355942,36356279-36356457,
36356719-36356918,36356938-36357014,36357110-36357111,
36357594-36357701,36357806-36358024,36358167-36358448
Length = 460
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 143 NPAIPVIP--SNEYGIPNDVSVQGLPTQEQQPIF 238
N +PV+ SN+YGI D+S+ P + + IF
Sbjct: 116 NARVPVLQYVSNQYGISCDISISNYPGRIKSKIF 149
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 203 QGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLE 382
Q + +EQQ Q P ++ Q + L +Q Q Q QQ+ + Q+Q+Q +
Sbjct: 96 QHMKAREQQQQQQQQPPQQRQQQPQHIQMQQMLLQRAAQQQQQQQQQQQQQQQQQQQQQQ 155
Query: 383 AAQAKNQ 403
Q + +
Sbjct: 156 QQQQQRR 162
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 116 NYLPPFDPRNPAIPVIPSNEYGIPND 193
N +PP+ P ++P IP + G+P +
Sbjct: 199 NGVPPYPPPQRSLPAIPPSTSGVPRE 224
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +2
Query: 185 PNDVSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQ 364
P GLP Q I T+ Q G + + + +Q Q Q QQ+
Sbjct: 177 PQHPQGSGLPNQNS--IDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQQQQKPNTN 234
Query: 365 RQKQLEAAQAKNQANNL--PAPQAPRQF 442
Q Q + NQA + P PQ P ++
Sbjct: 235 DQVQSVPNGSSNQATRIATPLPQGPSRY 262
>11_05_0076 - 18861629-18861862,18862421-18862532,18863001-18863146
Length = 163
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 56 VSSRLERRAPEPLLPHWP 3
VS+ LE+R P LLP WP
Sbjct: 76 VSASLEKRQPALLLPTWP 93
>08_02_1620 -
28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 182 IPNDVSVQGLPTQEQQPIFQTSPING-QENQGPYFTSDIKNLDENLKQNQYQIQQENYRT 358
IP+ + G + QP+ Q+S G Q+N +++L + Q+ + QQ + +
Sbjct: 301 IPSSLQ-PGQSIPQTQPMVQSSSQGGIQQNALNSVPQSVQSLLQQPTQSAMRQQQHSQSS 359
Query: 359 FQRQKQLEAAQAKNQAN 409
Q L+ AQ Q N
Sbjct: 360 MHPQPSLQQAQPTQQPN 376
>08_02_0222 + 14446967-14448310
Length = 447
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +2
Query: 185 PNDVSVQGLPTQEQQ-PIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQEN-YRT 358
P Q P + I Q + Q+++ ++ + K L + +KQ QY Q+N +
Sbjct: 215 PEQSIEQHFPAEHNNIQIQQQAYYQSQDHEQCQYSDEEKYLLQQIKQEQYYYNQQNCFLP 274
Query: 359 FQRQKQLEAAQAKNQANNLPAPQAPRQ 439
Q ++L + Q +LP Q ++
Sbjct: 275 GQGNQELYYNDEQQQIFSLPEHQCSQE 301
>08_01_0519 - 4518256-4519623,4520840-4521230,4521313-4521525,
4521632-4521723,4522226-4522342,4522641-4522704,
4523175-4523228,4523579-4523666,4523788-4524023,
4525258-4525478,4525634-4525827,4525938-4525995,
4526771-4526824,4526851-4527473,4527580-4527640,
4528417-4528590,4528803-4529063,4529201-4529320,
4529388-4530022,4530062-4530828,4530915-4531012,
4531101-4531155,4531230-4531318
Length = 2010
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 143 NPAIPVIP--SNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGP 277
+P+ P P S YG+P S+QG EQQ I +N + Q P
Sbjct: 1417 SPSTPNTPRDSQRYGMPRPTSLQG---DEQQRIQYNQMLNSRSLQQP 1460
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/89 (21%), Positives = 34/89 (38%)
Frame = +2
Query: 125 PPFDPRNPAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNL 304
PP P + P P P + + P +EQQ +E + + +
Sbjct: 113 PPSPPPSAPPPPPPPPTQPPPREAQLAPPPPREQQSKSALPRAETEEERRARKKREYEKQ 172
Query: 305 DENLKQNQYQIQQENYRTFQRQKQLEAAQ 391
++NQ ++Q Q+ +Q+ AAQ
Sbjct: 173 RAEDRKNQQMMRQSQATVLQKTQQVRAAQ 201
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 317 KQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPA 421
+Q Q Q QQ+ + Q+Q+Q Q + Q + +PA
Sbjct: 550 QQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPA 584
>02_05_0640 -
30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +2
Query: 125 PPFDPRNPAIPVIPSNEYGIPNDVSVQGLPTQEQQPI-FQTSPINGQENQGP 277
P F P NP P+ N G P + QPI SPI G E P
Sbjct: 186 PSFHPSNPTSPLSAMNTIGSPTQSGI-------DQPIGANVSPIKGAEFSSP 230
>02_04_0188 -
20766093-20766449,20766526-20766624,20766717-20766821,
20769149-20769241,20769673-20769765,20770075-20770176,
20770294-20770368,20770465-20770584
Length = 347
Score = 27.1 bits (57), Expect = 9.1
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Frame = +2
Query: 128 PFDPRN--PAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSP---INGQENQG-PYFTS 289
P DP+N I I S +Y IP V + Q IF +P I +E + P+F
Sbjct: 185 PDDPKNFRKTIGRIVSIQYKIPEYVHISQDCRQLLSRIFVANPAKRITIREIRNHPWFMK 244
Query: 290 DIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAP 433
++ Q +Y + + RTF Q E + +A P P
Sbjct: 245 NLPRELTEAAQAKYYKKDNSARTFSDQTVDEIMKIVQEAKTPPPSSTP 292
>02_02_0479 -
10775382-10775656,10776513-10777535,10777725-10778461,
10779008-10779155,10779331-10779856
Length = 902
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 198 DTSLGIPYSLLGITGMAGFLGSKGGR*FWVCCG 100
D L + + LGI G+ +GS G VCCG
Sbjct: 687 DLQLQVDHEELGIRGVVLVIGSAGSFACLVCCG 719
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,078,692
Number of Sequences: 37544
Number of extensions: 257411
Number of successful extensions: 854
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -