Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320H07f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    25   0.36 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   3.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   3.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   3.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   7.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.7  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   7.7  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 509 WRELLWSSQQAWSKSVAQWFLKRIALG 429
           W  + W S   W++   Q++L + A G
Sbjct: 164 WLSVFWGSAWQWNEERKQYYLHQFATG 190


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2
          protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 51 GNLKAQPSCCRNEDSC 98
          G  K   +CCR  D C
Sbjct: 50 GRFKHTDACCRTHDMC 65


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 51  GNLKAQPSCCRNEDSC 98
           G  K   +CCR  D C
Sbjct: 55  GRFKHTDACCRTHDMC 70


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 51  GNLKAQPSCCRNEDSC 98
           G  K   +CCR  D C
Sbjct: 55  GRFKHTDACCRTHDMC 70


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 221 EQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQ 370
           EQQ   Q    + Q+ Q      + +   +  +Q Q Q QQ+  +  Q+Q
Sbjct: 413 EQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQ 462


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 164 VLPEWLDSLGQKVADSFGF 108
           ++  WL SLG  +A  FG+
Sbjct: 172 IIAIWLFSLGWTIAPMFGW 190


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 328 VPDPTRELPHFPKA 369
           +P P R LP+FP +
Sbjct: 225 IPLPVRVLPNFPSS 238


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 164 VLPEWLDSLGQKVADSFGF 108
           ++  WL SLG  +A  FG+
Sbjct: 48  IIAIWLFSLGWTIAPMFGW 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,919
Number of Sequences: 438
Number of extensions: 2909
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)