Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320H02f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 36 2e-05
03_03_0009 - 13691820-13691900,13693576-13693719 44 6e-05
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 44 1e-04
01_06_0514 + 29955129-29955796,29955903-29956023 33 0.14
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 32 0.32
03_01_0576 + 4255153-4255238,4256051-4256153,4256235-4256556,425... 31 0.56
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 31 0.74
03_06_0316 + 33091194-33091370,33091451-33092155 30 0.98
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103... 30 1.3
01_06_1326 - 36318942-36319037,36319126-36319135,36319298-363193... 30 1.3
11_01_0316 + 2361904-2362237,2362454-2363178 29 1.7
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 29 1.7
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 1.7
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 29 3.0
07_01_0608 + 4515709-4515951,4516085-4516678 28 4.0
07_03_1788 + 29523216-29524867,29525048-29525075 28 5.2
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 5.2
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 27 6.9
01_03_0145 - 13116302-13116958,13117365-13117430,13117786-131180... 27 6.9
12_01_0363 + 2750982-2751479 27 9.1
10_01_0240 - 2506901-2507008,2507950-2508322,2508418-2508612,250... 27 9.1
08_02_1362 + 26406710-26408530 27 9.1
06_03_1390 - 29831098-29831514,29831613-29831735,29832238-298325... 27 9.1
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 27 9.1
04_03_0963 + 21285160-21285579,21286585-21286635,21287017-212875... 27 9.1
>07_03_1530 +
27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 35.9 bits (79), Expect(2) = 2e-05
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 59 EYKSGDFIFAKVKGYPAWPA 118
++K GD + AK+KG+PAWPA
Sbjct: 22 QWKVGDLVLAKMKGFPAWPA 41
Score = 29.1 bits (62), Expect(2) = 2e-05
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 140 KKYFVYFYGTGEIANLPPNMIFDYAENKDKFL--TKTVKRRDFNDGVKQI 283
KK VYFYGT +IA + + E K K L + K DF VK+I
Sbjct: 81 KKLLVYFYGTKQIAFCNYTDLEAFTEEKRKSLLAKRHGKGADFVRAVKEI 130
>03_03_0009 - 13691820-13691900,13693576-13693719
Length = 74
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Frame = +2
Query: 59 EYKSGDFIFAKVKGYPAWPARV-------QRLNGKKYFVYFYGTGEI 178
++K GD + AK+KG+PAWPA + Q KK VYFYGT ++
Sbjct: 28 QWKVGDLVLAKMKGFPAWPAMISEPEQWGQTSVKKKILVYFYGTKQM 74
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Frame = +2
Query: 38 KMGKKVREYKSGDFIFAKVKGYPAWPARVQRLNG-------KKYFVYFYGTGEI 178
K K + + GD + AKVKGYP WPA+V + +K FV F+GT EI
Sbjct: 10 KAHKWTTQPQLGDLVLAKVKGYPPWPAKVSKPEDWDQMPVPRKVFVVFFGTREI 63
>01_06_0514 + 29955129-29955796,29955903-29956023
Length = 262
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -3
Query: 501 ALPRGVFGSLTGLAGVFTDSALDFLPFGFPSSITRAPVSSESSTAVSLFSVLDVPIDNPT 322
AL S G+ F DS FL G P + + A + S +V+L + D +
Sbjct: 91 ALTADESSSCLGVTSSFLDSIRPFLELGLPKAASDAAMQKNGSGSVTLDEIADFALSEEY 150
Query: 321 TC 316
TC
Sbjct: 151 TC 152
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 329 LSIGTSNTLNNDTAVEDSDDTGALVIDEGKPKGRKSKAE 445
L + + N +N+T E D GALV EGK K R S+AE
Sbjct: 748 LKLLSINMTSNNTVEETPKDLGALVPLEGKVKKRGSRAE 786
>03_01_0576 +
4255153-4255238,4256051-4256153,4256235-4256556,
4257451-4257823,4257857-4258103,4258189-4258248,
4258767-4258836,4259299-4259357,4259855-4259944
Length = 469
Score = 31.1 bits (67), Expect = 0.56
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 191 PNMIFDYAENKDKFLTKTVKRRDFNDGVKQIEHDFANNVPLEQVVGLSIGTSNTLNNDTA 370
P F KD T + N GV QI + N VP+ + + ++N LN+DT+
Sbjct: 322 PQKYFMKRWKKDVKSASTGNQELLNGGVSQIPSSYLN-VPVPFIDPQHVQSNNELNHDTS 380
Query: 371 VEDS 382
V +S
Sbjct: 381 VSNS 384
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 374 EDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKEPKTPRGKAKRDESR 520
+DS+D+ D GK K +KSK ES + P + K + K K+ +S+
Sbjct: 494 KDSEDSPVADADGGKKKKKKSK-ESEEPPVATAEGEKKEKKKKKKSDSQ 541
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 30.3 bits (65), Expect = 0.98
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 416 KPKGRKSKAESVKTPAKPVKEPK-TPRGKAK 505
KP + A K+PAKP +PK P+ KAK
Sbjct: 177 KPAAKPKAAAKPKSPAKPAAKPKAAPKAKAK 207
>05_03_0389 -
13409848-13409964,13410049-13410114,13410209-13410325,
13410822-13410893,13410979-13411258,13411528-13411730,
13412230-13412316,13412705-13412758,13413042-13413221,
13414402-13414576,13414628-13414918,13414923-13415344
Length = 687
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +2
Query: 14 GGSGIVILKMGKKVREYKSGDFIFAKVKGYPAWPARVQRLNGKKYFVYFYGTGEIANLPP 193
GG+ L + K R + +++FA + GY PA VQ G Y YF G G IA P
Sbjct: 552 GGAYPPDLSLITKAR-HNGQNYVFALLTGYRDPPAGVQIREGLHYNPYFPG-GAIA--MP 607
Query: 194 NMIFDYA 214
M+ D A
Sbjct: 608 KMLIDGA 614
>01_06_1326 -
36318942-36319037,36319126-36319135,36319298-36319368,
36319594-36319679,36320217-36320295,36320401-36320493,
36320656-36320678,36320829-36320956,36321182-36321278,
36321394-36321646,36321744-36321887,36335560-36335811
Length = 443
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 211 IIEYHVWW*I-CNFTSAIEIYKIF-LSIQSLYPSWP 110
++ WW I CN T AIE + I S+QS+ PS P
Sbjct: 343 LVPAEAWWYIACNTTDAIEPHTIIGSSLQSMTPSTP 378
>11_01_0316 + 2361904-2362237,2362454-2363178
Length = 352
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 416 KPKGRKSKAESVKTPAK-PVKEPKTPRGKAKRDE 514
KP G+ K E +TP K +E +TP GK K +E
Sbjct: 29 KPAGKGGKPEKGETPGKGKPEERETPPGKGKPEE 62
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 263 NDGVKQIEHDFANNVPLEQVVGLSIGTSNTLNNDTAVEDSDDTGALVIDEGK-PKGRKSK 439
+D +++ + L+Q G +I T D V++ + GA EG PKG+KSK
Sbjct: 270 HDPTPEMDRTPGKSKTLKQRRGGAISTLAVPEGDKEVDEQEAPGASASVEGAAPKGKKSK 329
Query: 440 AESVK 454
++ K
Sbjct: 330 SKKQK 334
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 17 GSGIVILKMGKKV--REYKSGDFIFAKVKGYPAWPARV 124
GSG ++ G R + GD ++ KVK +P WP V
Sbjct: 27 GSGAIVHPGGGGAWPRGVRFGDMVWGKVKSHPWWPGHV 64
>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +2
Query: 257 DFNDGVKQIEHDFANNVPLEQVVGLSIGTSNTLNNDTAVEDSDDTGALVIDEGKPKGRKS 436
D ++ K+ E + L +S+ SNT+ + ++E + +G L I + KG++
Sbjct: 967 DIHNSPKRTEDKNNADEQLNTTSTMSLPPSNTVEDKVSIEAPETSGNLTIRVARDKGKRR 1026
Query: 437 K 439
K
Sbjct: 1027 K 1027
>07_01_0608 + 4515709-4515951,4516085-4516678
Length = 278
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 362 DTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKEPKTPRGKAKR 508
+ AVE++ K K + + K AKP KE K KAK+
Sbjct: 21 EEAVEETTAAEEKAAKPAKEKKKAGRPPKEKKEAKPAKEKKVKEAKAKK 69
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 62 YKSGDFIFAKVKGYPAWPARV--QRLNGKKYFVYFYGTGEIA 181
+ GD ++ K +PAWP V G + V F+G +A
Sbjct: 61 FAPGDLVWGKKLSHPAWPGEVISAAPTGAQLLVSFFGDKALA 102
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 27.9 bits (59), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 59 EYKSGDFIFAKVKGYPAWPARV 124
E++ D ++ KVK +P WP +
Sbjct: 247 EFRVSDLVWGKVKSHPWWPGEI 268
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 233 LTKTVKRRDFNDGVKQIEHDFANNVPLEQVVGLSI-GTSNTLNNDTAVEDSDDTGALVID 409
L ++RRD + +K ++ D + E + G I G T+N VE+ GALV+D
Sbjct: 20 LKDELRRRDLS--IKGLKDDLVKRLA-EALQGEVIDGGEETVNGTPPVENQTQDGALVLD 76
Query: 410 EGKPKGRKSKAE 445
+ G ++ AE
Sbjct: 77 DA--SGFQASAE 86
>01_03_0145 -
13116302-13116958,13117365-13117430,13117786-13118065,
13118283-13119028
Length = 582
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 471 TGLAGVFTDSALDFLPFGFPSSITRAPVSSESSTAVSLFSVLDVPIDNPTTCS 313
+G + VF L F P I P +S++ + +L P+D TTCS
Sbjct: 189 SGKSSVFL--RLSFPPSNVHDGILPTPGFHNASSSTTRDGILPTPVDRNTTCS 239
>12_01_0363 + 2750982-2751479
Length = 165
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 395 ALVIDEGKPKGRKSKAESVKTPAKPVKE--PKTPRGKAKR 508
AL DEG K +++ +V++ ++PV E P TP A R
Sbjct: 44 ALPDDEGSKKKKRAGPAAVRSASRPVPETAPLTPTAGAAR 83
>10_01_0240 -
2506901-2507008,2507950-2508322,2508418-2508612,
2508771-2508885,2510027-2510132,2510253-2510366,
2510521-2510538
Length = 342
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 182 NLPPNMIFDYAENKDKFLTKTVKRRDFNDGVKQIEHDFANNVP--LEQVVGLSIGTSNTL 355
N+ PN+ ++AE L++ ++ DG + E+ N L + L+ G +T
Sbjct: 206 NVDPNVDPEFAEALR--LSEIARQEAAADGASRYEYSVDPNADPELAETFRLAAGEPSTS 263
Query: 356 NNDTAVEDSD 385
N DT + +SD
Sbjct: 264 NTDTVLLESD 273
>08_02_1362 + 26406710-26408530
Length = 606
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 311 LEQVVGLSIGTSNTLNNDTAVEDSDDTGALVIDEGKPKGRKSKAESVKTPAKPVKE 478
LE+ V +G+S + + ED DD GA +G P R + + A V +
Sbjct: 114 LEEEVRALLGSSARRLSLDSFEDLDDAGAATTPDGSPPRRDALSPEAAASASGVAD 169
>06_03_1390 -
29831098-29831514,29831613-29831735,29832238-29832501,
29833313-29833654
Length = 381
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 425 GRKSKAESVKTPAKPVKEPKTPRG 496
G+KSKA S TP + ++E RG
Sbjct: 29 GQKSKASSASTPTRSIQELSDERG 52
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +2
Query: 248 KRRDFNDGVKQIEHDFANNVPLEQVVGLSIGTSNTLNNDTAVEDSDDTGALVIDEGKPKG 427
KR+ ++E + V L + L +ED ++ A K K
Sbjct: 595 KRKSDQSAANEVESSVESEASAADAVALLLKHKRGLQTSEDMEDENEPQA-----SKRKS 649
Query: 428 RKSKAESVKTPAKP 469
+KSK + V PA+P
Sbjct: 650 KKSKQKRVLGPARP 663
>04_03_0963 +
21285160-21285579,21286585-21286635,21287017-21287502,
21287866-21287961
Length = 350
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 308 PLEQVVGLSIGTSNTLNNDTAVEDSDDTGALVIDEGKPKGRKSKAESVKT 457
P+E +GL + + +T +E + A+ +EG+ GR + V T
Sbjct: 45 PVETDIGLKVASPTMFGFNTKIEGTGKNMAVKREEGEGGGRPGVSSGVST 94
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,168,447
Number of Sequences: 37544
Number of extensions: 283019
Number of successful extensions: 882
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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