Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320G12f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0520 - 18495118-18498237 33 0.18
01_03_0003 + 11509530-11512772 32 0.32
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 31 0.74
01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908 30 0.98
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 30 1.3
07_01_1174 + 11097044-11097070,11097950-11098096,11098381-110984... 30 1.3
02_05_0114 + 25958834-25961296 30 1.3
06_01_0422 + 3034556-3034777,3034859-3035138,3036398-3036483,303... 29 1.7
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 29 2.3
02_05_1039 + 33707196-33708815 29 3.0
09_02_0027 + 3105963-3106276,3106298-3107027,3107069-3107134,310... 28 4.0
01_05_0252 - 19959347-19959541,19960307-19960402,19961028-199611... 28 4.0
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 5.2
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129... 28 5.2
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423... 28 5.2
12_01_0338 - 2594680-2594796,2595079-2595147,2595233-2595338,259... 27 6.9
11_03_0026 - 9057965-9058234,9059410-9059522,9059612-9059802,906... 27 6.9
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 27 6.9
07_01_0434 - 3302926-3303072,3303402-3303545,3303644-3304293,330... 27 6.9
07_01_0028 + 217214-218239 27 6.9
05_03_0662 + 16732965-16733037,16733310-16733413,16734468-167348... 27 6.9
11_01_0768 - 6442332-6443792 27 9.1
07_03_0340 + 16949105-16949109,16949328-16949436,16949547-169496... 27 9.1
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 32.7 bits (71), Expect = 0.18
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 239 GLERCWLEVAEGQISSGRTDAAKELLTKILNHNNSCARAYQYLGQIAEKEQNYKSAAHNY 418
G ER W++ A + G D ++LL + L S + + LGQ+ ++ + A Y
Sbjct: 764 GTERVWMKSAIVERELGNVDEERKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVY 823
Query: 419 DNAWSH 436
+NA H
Sbjct: 824 ENALKH 829
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 31.9 bits (69), Expect = 0.32
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 107 GYQDDPYVV-LAIANAYNITKQPTRAKNILKRTISSIVWSPEKADGLERCWLEVAEGQIS 283
G QD P + LAI+N ++ LKR E GLE CW+ + QI+
Sbjct: 915 GQQDFPCLQELAISNCLSLNSLSLYNMVALKRLTVKGCQDLEAIKGLEECWVSINHSQIN 974
Query: 284 SGRTDAAKELL 316
T E++
Sbjct: 975 CTDTSGYSEIV 985
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 30.7 bits (66), Expect = 0.74
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 53 KGQAERVLQDLLPLVTEDGYQDDPYVVLAIANAYNITKQPTRAKNILKRTISSIVWSPEK 232
KGQ E DL ++ D P V ++ + AK +L+ + +W PE
Sbjct: 207 KGQYEGPDMDLAAMLERDVLDSTPGV------RWDDVAGLSEAKRLLEEAVVLPLWMPEY 260
Query: 233 ADGLERCWLEVAE-GQISSGRTDAAKELLTK 322
G+ R W V G +G+T AK + T+
Sbjct: 261 FQGIRRPWKGVLMFGPPGTGKTLLAKAVATE 291
>01_06_1398 -
37027659-37028112,37028393-37028460,37028543-37028908
Length = 295
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 71 PAPPGPCSWSPAGGAPAEVSVQP 3
PAPP PC AG APA S+ P
Sbjct: 30 PAPPPPCPCPRAGAAPAAESLLP 52
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +2
Query: 107 GYQDDPYVVLAIANAYNITKQPTRAKNILKRTISSIVWSPEKADGLERCWLEVAEGQISS 286
G Q+D + I +AY ++ P A N+ +R +++ P A+ + A+ I +
Sbjct: 239 GSQEDSFTKDEIISAYTRSRVPQMASNVSQRRAGTVL--PPPAEDFSYSAVVAAKHPIKN 296
Query: 287 GRTDAAKELLTKILNHNNSCARA 355
G T+ A + +++ N+S R+
Sbjct: 297 GITNTANQ--SRLSPPNSSSGRS 317
>07_01_1174 +
11097044-11097070,11097950-11098096,11098381-11098424,
11098915-11098952,11099787-11099877,11100873-11100978,
11101062-11101132,11101221-11101290,11101547-11101609,
11101883-11102058,11102104-11102128,11102729-11102800,
11102903-11103004,11103089-11103163,11103749-11103871,
11104320-11104433,11106012-11106053,11106328-11106444,
11106983-11107039,11107424-11107441
Length = 525
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +2
Query: 278 ISSGRTDAAKELLTKILNHNNSCARAYQYLGQIAEKEQNYKSAAHNYDNAWSHAGRGDLS 457
+ G A E L K++ AY+ LG++ + ++Y ++ +Y + S + D
Sbjct: 293 VELGEYQKASEFLEKLVKVIPDKVEAYRLLGEVKFELKDYDGSSSSYRKSLSASENIDFE 352
Query: 458 VGYKLAHCYLKLKKYPECIIV 520
V L + L KK + + V
Sbjct: 353 VLRGLTNALLAAKKPDQAVDV 373
>02_05_0114 + 25958834-25961296
Length = 820
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 VAEGQISSGRTDAAKELL-TKILNHNNSCARAYQYLGQIAEKEQNYKSAAHNYDNAWSHA 439
V +G R D A++LL K +N Y YL Q K N A +Y+ SH
Sbjct: 300 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHG 359
Query: 440 GRGDLSVGYKLAHCYLKLKKYPECI 514
+ + L C+ KL E I
Sbjct: 360 IETNCHIVSYLLQCFRKLGMTSEVI 384
>06_01_0422 +
3034556-3034777,3034859-3035138,3036398-3036483,
3036614-3036837,3036911-3036971,3037634-3037828,
3037981-3038205
Length = 430
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 386 EQNYKSAAHNYDNAWSHAGRGDLSVGYKLAHCYLKLKKYPECI 514
E YK A +Y A + GD+S K A Y + +Y EC+
Sbjct: 38 EGRYKRAVEHYARA-AALDPGDISFPIKCAKSYFHMDQYEECV 79
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 VAEGQISSGRTDAAKELL-TKILNHNNSCARAYQYLGQIAEKEQNYKSAAHNYDNAWSHA 439
V +G R D A++LL K +N Y YL + K N +A +Y+ SH
Sbjct: 418 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 477
Query: 440 GRGDLSVGYKLAHCYLKLKKYPECI 514
+ + L C+ KL E I
Sbjct: 478 IETNCHIVSYLLQCFRKLGMTSEAI 502
>02_05_1039 + 33707196-33708815
Length = 539
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 207 RPSCGRQKRLTDSKDAGWKWQRDR*VPDGRTLP 305
R +C R + DS+ W W PD R LP
Sbjct: 176 RNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
>09_02_0027 +
3105963-3106276,3106298-3107027,3107069-3107134,
3107192-3107324,3108985-3109088
Length = 448
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 137 AIANAYNITKQPTRAKNILKRTISSIVWSPEKADGLERCWLEVAEGQISSGRTDAAKELL 316
A A +K A +++++ +S++ WS E+ RC V E ++ + + D ++ L
Sbjct: 221 AAAGGAFFSKMVRGAIDLIEKMVSNMGWSEERLQTRRRCMYTVKETEMLATKLDLLRKQL 280
>01_05_0252 -
19959347-19959541,19960307-19960402,19961028-19961132,
19961220-19961439,19961515-19961584,19961659-19962181,
19962621-19962672,19963644-19963867,19963955-19964022,
19965005-19965231,19965747-19965864,19965938-19966058
Length = 672
Score = 28.3 bits (60), Expect = 4.0
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 242 LERCWLEVAEGQISSGRTDAAKELLTKILNHN---NSCARAYQYLGQIAEKEQNYKSAAH 412
++RCW ++ Q D +EL KI+ + NSC+ L A K QN + H
Sbjct: 312 IQRCW--DSDPQQRPSFKDITEEL--KIIEKHIAVNSCS-----LASPANKSQNGNTEVH 362
Query: 413 NYDNAWSHAGRGDL-SVGYKL 472
+Y A S +G+L + G KL
Sbjct: 363 HYQEALSWLNQGELFAKGNKL 383
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/83 (22%), Positives = 41/83 (49%)
Frame = +2
Query: 107 GYQDDPYVVLAIANAYNITKQPTRAKNILKRTISSIVWSPEKADGLERCWLEVAEGQISS 286
G Q+D + I +AY ++ P A ++ +R +++ P A+ + A+ I +
Sbjct: 296 GSQEDSFTKDEIISAYTRSRVPQMASSVSQRRAGTVL--PPPAEDFSYSAVVAAKHPIKN 353
Query: 287 GRTDAAKELLTKILNHNNSCARA 355
G T+ A + +++ N+S R+
Sbjct: 354 GITNTANQ--SRLSPPNSSSGRS 374
>02_03_0315 -
17610605-17610855,17611304-17611370,17612876-17612941,
17613037-17613158,17613245-17613428,17614262-17614494,
17614580-17614913,17615043-17615186,17615303-17615344
Length = 480
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 86 ASLAAPAPPGPCSWSPAGGAPAEVS 12
A A PAPP P SPA APA V+
Sbjct: 270 APAARPAPPKPEKQSPAPPAPAPVA 294
>01_06_1263 +
35840502-35841308,35841763-35841969,35842272-35842370,
35843361-35843464,35844521-35844698,35844774-35845244,
35845383-35845523,35846290-35846349,35846427-35846490,
35847295-35847524,35847606-35847704
Length = 819
Score = 27.9 bits (59), Expect = 5.2
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Frame = +2
Query: 50 NKGQAERVLQDLLPLVTEDGYQDDPYV-------VLAIANAYNITKQPTRAKNILKRTIS 208
N+ R+L LL + ++ + YV + I+ +Y T A +L
Sbjct: 688 NQFHYARLLTALLEITRSQRFEPNLYVERMRFEAIKCISKSYRPTLPVKYAAQVLGFMAI 747
Query: 209 SIVWSPEKADGLERC--WLEVAEGQISSGRTDAAKELLTKI 325
V ++ADGLE C WL+ +S + ++ TK+
Sbjct: 748 DEVCEAKRADGLEECEEWLKAHGAVLSVDNNNGELQIDTKV 788
>12_01_0338 -
2594680-2594796,2595079-2595147,2595233-2595338,
2596099-2596154,2596356-2596415,2596544-2596622,
2596870-2596964,2597085-2597198,2597642-2597693,
2598870-2599015
Length = 297
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 315 SSSLAASVRPELICPSATSSQHLSSPSAFSGDHTMDEIVLL 193
S LAA+ P + C S S+ L + S S D +VL+
Sbjct: 39 SVGLAATAAPRIFCQSINSADVLGASSTTSDDAIPQPVVLI 79
>11_03_0026 -
9057965-9058234,9059410-9059522,9059612-9059802,
9060606-9060720,9061781-9061907,9062915-9062990,
9064247-9064365,9065430-9065593,9065666-9065779,
9065966-9066065,9066276-9066340,9068175-9068253,
9069513-9069659,9069904-9070161,9070657-9070852,
9071179-9071402,9072531-9072554
Length = 793
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 320 KILNHNNSCARAYQYLGQIAEKEQNYKSAAHNYDNAWSHAGRGDLSVGYKLAHCYLKLKK 499
++ N N +A +L + N + A +N A+ H G L+ Y +++K
Sbjct: 678 RLQNKNQCIVQALAFLFRYLRLCDNSQEALYNIARAYHHVGLNTLAAIYYEKALAVEVKD 737
Query: 500 YP 505
YP
Sbjct: 738 YP 739
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 348 AQELLWFKIFVSSSLAASVRPELICPSATS-SQHLSSPSAFSG 223
AQ WF + SSS ++S L+ P+A+S + L PS++ G
Sbjct: 51 AQASSWFFLSSSSSSSSSSSSTLVRPAASSHAASLRKPSSWGG 93
>07_01_0434 -
3302926-3303072,3303402-3303545,3303644-3304293,
3304410-3304493,3304651-3304703,3305127-3305197,
3305285-3305362,3305775-3305903,3305988-3306044,
3306693-3306923,3307748-3307882,3308609-3308684,
3308768-3309024,3309095-3309202,3309328-3309526,
3309600-3309604
Length = 807
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 371 QIAEKEQNYKSAAHNYDNAWSHAGRG-DLSVGYKLAHCYLKLKKYPECI 514
Q +E YK A N + S + L L CYLK + + ECI
Sbjct: 346 QYSEAAAKYKLAKDNLKSIPSQSAHSLQLVCTLNLMACYLKTRNFEECI 394
>07_01_0028 + 217214-218239
Length = 341
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 437 AGRGDLSVGYKLAHCYLKLKKYPEC 511
AG G+ V + C+L+L +YP C
Sbjct: 177 AGEGETMVTTREETCFLRLNRYPPC 201
>05_03_0662 +
16732965-16733037,16733310-16733413,16734468-16734861,
16736291-16736901,16739238-16739289,16739771-16739826,
16739962-16740190,16740980-16741212,16741480-16741740
Length = 670
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +3
Query: 9 NGNLCRRSSSWRPRTRARRSGC-CKTCYLWSPRTATRTTLTSCWPSLMHTI*PNSRRARR 185
+GN S +W RTRA R+G C + +P + S W S +A +
Sbjct: 183 SGNASPNSEAWPWRTRASRTGSGCSSRNTRTPPMGCLWSAISRWSEAYVAAYYPSDKAVQ 242
Query: 186 TSSKELFRPSCGRQKRLTDSKDAGWKWQR 272
+ + Q R D +DA W W R
Sbjct: 243 ADYELQSWYAEAVQSRHADKRDAPW-WSR 270
>11_01_0768 - 6442332-6443792
Length = 486
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 10 TETSAGAPPAGDQEQGPGGAGAARLATS 93
T TSA A P D+E P A ATS
Sbjct: 318 TATSAAAGPTADKETSPAAESTADTATS 345
>07_03_0340 +
16949105-16949109,16949328-16949436,16949547-16949642,
16949685-16949771,16952658-16953299
Length = 312
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 160 YIVCISDGQHDVRVVLVAVL 101
Y +CIS GQHD LVA L
Sbjct: 259 YYMCISCGQHDSHTQLVAYL 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,516,858
Number of Sequences: 37544
Number of extensions: 304215
Number of successful extensions: 1536
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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