Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320G12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical ... 29 2.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 3.5
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 28 4.7
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 28 4.7
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 4.7
AL032665-1|CAA21771.1| 294|Caenorhabditis elegans Hypothetical ... 28 4.7
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 28 4.7
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 4.7
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 4.7
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 4.7
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 4.7
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 4.7
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81527-4|CAB04274.2| 388|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical pr... 27 6.2
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 27 6.2
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 27 6.2
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 27 6.2
AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical... 27 6.2
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 27 6.2
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 27 6.2
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 27 6.2
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 27 6.2
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 87.8 bits (208), Expect = 4e-18
Identities = 44/128 (34%), Positives = 70/128 (54%)
Frame = +2
Query: 131 VLAIANAYNITKQPTRAKNILKRTISSIVWSPEKADGLERCWLEVAEGQISSGRTDAAKE 310
V +A + + KQ +AK +LK ++ VW+ + +D LE+CWL +A+ I+ + D A
Sbjct: 1176 VFGVARGHVLLKQVQKAKTVLKM-VNGRVWNFDDSDYLEKCWLMLADIYINQNKNDQAVT 1234
Query: 311 LLTKILNHNNSCARAYQYLGQIAEKEQNYKSAAHNYDNAWSHAGRGDLSVGYKLAHCYLK 490
L + +N +C +A++ G + EKEQ Y A Y+ A+ + GYKLA YLK
Sbjct: 1235 FLDLVFKYNCNCLKAFELYGYMREKEQKYVEAYKMYEKAFMATKERNPGFGYKLAFTYLK 1294
Query: 491 LKKYPECI 514
K+ CI
Sbjct: 1295 AKRLFACI 1302
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = +3
Query: 243 SKDAGWKWQRDR*VPDGRTLPKNCSRKS*TTTTLVLEPTNI 365
SKDAGWKW D DGR N + T+ V P NI
Sbjct: 224 SKDAGWKW-GDEKQTDGRRFMSNHATHLRDETSFVETPNNI 263
>AF003390-3|AAB54272.1| 1308|Caenorhabditis elegans Hypothetical
protein R155.2 protein.
Length = 1308
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 80 LAAPAPPGPCSWSPAGGAPAEVSVQP 3
LA P PP P + SP G AP + + +P
Sbjct: 827 LAKPPPPKPPAPSPGGAAPRQGAAKP 852
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 74 APAPPGPCSWSPAGGAPA 21
AP PP PC GGAPA
Sbjct: 30 APPPPPPCGGGCGGGAPA 47
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 344 KSCCGLRFS*AVLWQRPSVRNLSVPLPLPASIFRVRQPF 228
+S C L F QR S+R+ S+ L P+S +QPF
Sbjct: 717 ESICSLDFFDRSSLQRSSMRSESIQLASPSSAGEFKQPF 755
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 223 RPHDGRNSSFEDVLRARRLFG 161
R H+G N FED R R+L G
Sbjct: 862 RKHEGYNKEFEDFARFRKLIG 882
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1356 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1413
>AL032665-1|CAA21771.1| 294|Caenorhabditis elegans Hypothetical
protein Y76A2A.1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 4.7
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +2
Query: 41 ATKNKGQAERVLQDLLPLVTEDGYQDDPYVVLAIANAYNITKQPTRAKNILKRTISSIVW 220
A +NKG RV Q LL +++ D +V L + A NIT P + +I ++ I+
Sbjct: 108 AIRNKGDQARV-QLLLCNISDR----DIFVKLRCSAASNITALPAGSGHIAPKSQMRILL 162
Query: 221 SPEKADGLERCWLEV 265
+ +K DG+ + W E+
Sbjct: 163 TWQKPDGVTQ-WSEL 176
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 344 KSCCGLRFS*AVLWQRPSVRNLSVPLPLPASIFRVRQPF 228
+S C L F QR S+R+ S+ L P+S +QPF
Sbjct: 717 ESICSLDFFDRSSLQRSSMRSESIQLASPSSAGEFKQPF 755
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1273 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1330
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1594 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1651
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1594 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1651
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1594 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1651
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -2
Query: 322 FREQFFGSVRP--SGTYLSL-CHFQPASFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
F +Q G P G + + C QP + S+ + W HDGR F +R FGY+
Sbjct: 1289 FTQQLTGPTEPLKEGQSVHMDCVVQPINDPSLRIEWF-HDGRPLMFGSRIRTIHDFGYV 1346
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 264 TSSQHLSSPSAFS-GDHTMDEIVLLRMFFARVG 169
T +Q +SP F+ G TMDE++ R F +VG
Sbjct: 209 TKNQKEASPEEFADGAETMDELLRTRAHFHKVG 241
>Z81527-4|CAB04274.2| 388|Caenorhabditis elegans Hypothetical
protein F35E12.4 protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 333 WFKIFVSSSLAASVRPELICPS 268
W I +SSS AA + E +CP+
Sbjct: 6 WVYILISSSFAALLNAEFVCPN 27
>Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical
protein T23F1.7b protein.
Length = 799
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 250 SFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
SFE F PHD R+++F+ V R G +
Sbjct: 388 SFEDTLFFLLPHDKRDNAFQQVASLRLSHGQL 419
>Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical
protein T23F1.7a protein.
Length = 779
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 250 SFESVSLFWRPHDGRNSSFEDVLRARRLFGYI 155
SFE F PHD R+++F+ V R G +
Sbjct: 368 SFEDTLFFLLPHDKRDNAFQQVASLRLSHGQL 399
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 335 NNSCARAYQYLGQIAEKEQNYKSAAHNY 418
NN CA AY LG +++ + A NY
Sbjct: 189 NNQCAEAYSNLGNYYKEKGQLQDALENY 216
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 335 NNSCARAYQYLGQIAEKEQNYKSAAHNY 418
NN CA AY LG +++ + A NY
Sbjct: 11 NNQCAEAYSNLGNYYKEKGQLQDALENY 38
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 335 NNSCARAYQYLGQIAEKEQNYKSAAHNY 418
NN CA AY LG +++ + A NY
Sbjct: 189 NNQCAEAYSNLGNYYKEKGQLQDALENY 216
>AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical
protein Y37D8A.23c protein.
Length = 433
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 182 KNILKRTISSIVWSPEKADGL 244
K+++ R ++ W PEKADG+
Sbjct: 67 KSVMARMWEAVGWDPEKADGI 87
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 182 KNILKRTISSIVWSPEKADGL 244
K+++ R ++ W PEKADG+
Sbjct: 142 KSVMARMWEAVGWDPEKADGI 162
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 182 KNILKRTISSIVWSPEKADGL 244
K+++ R ++ W PEKADG+
Sbjct: 142 KSVMARMWEAVGWDPEKADGI 162
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 182 KNILKRTISSIVWSPEKADGL 244
K+++ R ++ W PEKADG+
Sbjct: 142 KSVMARMWEAVGWDPEKADGI 162
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 84 CYLWSPRTATRTTLTS 131
CYLW P T T TT T+
Sbjct: 180 CYLWVPLTTTTTTTTT 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,392,441
Number of Sequences: 27780
Number of extensions: 228225
Number of successful extensions: 929
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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