Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320G08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 34 0.054
Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical p... 30 0.87
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 1.2
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 29 1.5
AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical ... 28 4.7
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 4.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 27 6.2
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 27 6.2
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 8.1
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 34.3 bits (75), Expect = 0.054
Identities = 17/71 (23%), Positives = 40/71 (56%)
Frame = -1
Query: 323 KDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSRISTLDLN 144
K+ ED +++++ E E ++ + +G+E L++ V+SED +D+V + + + +
Sbjct: 203 KELMEDELDDDNMEDEEEFEDEEDEADESGNELDLSEGEEPVESEDDEDMVDEMMSDEED 262
Query: 143 NADSNGLIDES 111
N D +++ S
Sbjct: 263 NVDDEKIVEIS 273
>Z81051-12|CAB02861.2| 228|Caenorhabditis elegans Hypothetical
protein C55A6.1 protein.
Length = 228
Score = 30.3 bits (65), Expect = 0.87
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 518 AFNNGESECTLLLAGTLYIVDFQAMTQFRR 429
A+N G+ C +++ G Y++DF Q+ R
Sbjct: 136 AYNAGKCHCEVVICGRPYVIDFHQFLQYPR 165
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Frame = -1
Query: 368 IAGIRTNINQVPIEIKDETEDNVNE------NHDNAET---EIIITDNVQNSNGSEHIL- 219
+ GI N+N +P E DE + +NE D AE E+ + ++ S ++L
Sbjct: 2317 LQGIEDNLNSLPAEESDEIREKLNELRRRKQESDQAEALLQELSVISDMPISTLDLNMLQ 2376
Query: 218 --NQNVSSVQSEDIDDVVSRISTLDLNNADSN 129
N++S+ +E+ D + +I+ L +S+
Sbjct: 2377 GVEDNLNSLPTEEADKIREKINDLRRRKQESD 2408
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 29.5 bits (63), Expect = 1.5
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Frame = -1
Query: 356 RTNINQVPIEIKDETEDNVNENHDNAETEIIITDNV-QNSNGSEHILNQNVSS-VQSEDI 183
RT + ++ + +N D A E + QN + + L N SS VQS D
Sbjct: 85 RTGDDAALSRLQSQLAQMQQQNRDLATAEKAARKRLEQNQDALQRRLQNNESSGVQSRDF 144
Query: 182 DDVVSRISTLD----LNNADSNGLIDES*MKISKL-HLSN 78
DD+ +++ +D + N D +GL + +++ L H++N
Sbjct: 145 DDIRRQMNGVDAKLMIMNNDISGLRNSMDRQVTDLMHINN 184
>AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical
protein Y67D8C.4 protein.
Length = 167
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 243 ILHIICYYNFSFCIIMIFVDIIFSFIFYF 329
+ +I+C +FS C+ F IFS+ F F
Sbjct: 120 LAYIVCVLHFSGCLSHFFKQFIFSWFFAF 148
>Z83218-7|CAB05685.2| 283|Caenorhabditis elegans Hypothetical
protein C31A11.3 protein.
Length = 283
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 252 IICYYNFSFCIIMIFVDIIFSFIFYFNWHLINICSYTGYSFG 377
I +Y FS CI +++ I +F+ Y ++ + SFG
Sbjct: 51 IDAFYTFSICISRVYIPITMTFVDYIIKNMSFYLFWASTSFG 92
>Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical
protein M28.4 protein.
Length = 735
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 221 LNQNVSSVQSEDIDDVVSRISTLDLNNADSNGLIDES 111
LN VS+ S +DD S + +D+N+ D +G D++
Sbjct: 210 LNSFVSNYTSTVVDDTESGVGIVDVNDFDLSGYRDQN 246
>Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical
protein F22G12.8 protein.
Length = 247
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -1
Query: 368 IAGIRTNINQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSE 189
I +R ++ P ++ E + + + T+ + SNG E I+N+ + +
Sbjct: 41 IESMRDKTSKKPASNRNHEEIGLAFLKSELDNLVETTEGIMKSNGIELIINKEIDQTKIR 100
Query: 188 DIDDVVSRISTLDLNN-ADSNGLIDES*MKISKLHL 84
+I +SR+ ++LN A++ G I +KI K++L
Sbjct: 101 EI--ALSRMK-IELNTLAEAAGAI----LKIRKINL 129
>AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical
protein K11D12.8 protein.
Length = 303
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 234 SITILHIICYYNFSFCIIMIFVDIIFSFIFYFNW 335
SI +L + + ++C+ +I I+++ FYF W
Sbjct: 261 SILLLQGVSIFLNNYCLSLIITCILYNNTFYFKW 294
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/90 (20%), Positives = 45/90 (50%)
Frame = -1
Query: 347 INQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVS 168
I+ +E ++ETE+ V+E + AE + + + +NS + +N + ++ + V
Sbjct: 495 ISDFLVENQEETEEKVSEAAEKAENPMKLAEIDENSENLDISAAENAENAENH-VTAVAE 553
Query: 167 RISTLDLNNADSNGLIDES*MKISKLHLSN 78
++ + ++ N ++ +ISK+ S+
Sbjct: 554 SENSENFSSESENPAENDENPEISKIMTSS 583
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 302 VNENHDNAETEIIITDNVQNS-NGSEHILNQNVSSVQSEDIDDVVSRISTLDLNNADSNG 126
V+++ +ET+I +T+ QN NG + + +QS D D V +++ ++ +N+ S
Sbjct: 886 VDQSSSKSETQIPVTECSQNHLNGKG-----SAAQIQSADFDKVSNQLLSIKVNSEKSEQ 940
Query: 125 LIDES*MKIS 96
D + +S
Sbjct: 941 SADVELLLVS 950
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 203 SVQSEDIDDVVSRISTLDLNNADSNGLIDES*MKISKLHLSNWK 72
S Q+ ++DD+++R+ + + + + +IDE +I K LS K
Sbjct: 684 SRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLK 727
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = -1
Query: 368 IAGIRTNINQVPIEIKDETEDNVNENHDNAETEIIITDNVQNSNGSE 228
++ + + Q+ +E+KD+ ++ +N ETE++ V G E
Sbjct: 24 VSSVMQGVKQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGME 70
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 203 SVQSEDIDDVVSRISTLDLNNADSNGLIDES*MKISKLHLSNWK 72
S Q+ ++DD+++R+ + + + + +IDE +I K LS K
Sbjct: 684 SRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLK 727
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -1
Query: 335 PIEIKDETEDNVNENHDNA---ETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSR 165
P+E + + E +V + +DNA E E + +NS E +L V SE V
Sbjct: 3174 PLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYE 3233
Query: 164 ISTLDLNNADS 132
+ + D+
Sbjct: 3234 LEIVSETTTDT 3244
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -1
Query: 335 PIEIKDETEDNVNENHDNA---ETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSR 165
P+E + + E +V + +DNA E E + +NS E +L V SE V
Sbjct: 3174 PLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYE 3233
Query: 164 ISTLDLNNADS 132
+ + D+
Sbjct: 3234 LEIVSETTTDT 3244
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -1
Query: 335 PIEIKDETEDNVNENHDNA---ETEIIITDNVQNSNGSEHILNQNVSSVQSEDIDDVVSR 165
P+E + + E +V + +DNA E E + +NS E +L V SE V
Sbjct: 3174 PLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSGEKVLTVKALDVDSEHFGAVSYE 3233
Query: 164 ISTLDLNNADS 132
+ + D+
Sbjct: 3234 LEIVSETTTDT 3244
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -1
Query: 341 QVPIEIKDETEDNVNENHDNAETE----IIITDNVQNSNGSE--HILNQNVSSVQSEDI 183
QV D+V + N T+ +I T V+N NG+E H N + +Q++ +
Sbjct: 428 QVATRFTTNIHDDVGKEEPNKNTDMNRLVIFTYGVENKNGAEYAHFYYDNFTMLQAQSL 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,406,031
Number of Sequences: 27780
Number of extensions: 168807
Number of successful extensions: 720
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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