Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320G06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0457 - 29524544-29525962,29526518-29526606,29526841-295268...    29   3.0  
08_01_0463 - 4075037-4075316,4075997-4076151,4076818-4078861,408...    27   9.1  

>01_06_0457 -
           29524544-29525962,29526518-29526606,29526841-29526892,
           29527573-29527677,29528181-29528208,29528279-29528343,
           29528808-29528880,29528932-29529113
          Length = 670

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 352 TKNKLLIICIDVCHQHGDSFN*TNGSKY 269
           T  +L+++C D+C    DSFN  + SKY
Sbjct: 253 TLRRLILLCGDLCQVTYDSFNSDSHSKY 280


>08_01_0463 -
           4075037-4075316,4075997-4076151,4076818-4078861,
           4080757-4081589
          Length = 1103

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 460 TAGPLVVIKHYVLCSARTI*HLCHPSSSAGDNMYKRTK 347
           T G L  ++H  LCS +T  H+     +AGD  +++ +
Sbjct: 810 TLGRLPELRHLKLCSCKT--HVVSVEKAAGDGYFRKLR 845


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,863,018
Number of Sequences: 37544
Number of extensions: 211983
Number of successful extensions: 388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)