Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS320G04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.47 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.47 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.47 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   2.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   2.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   2.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   2.5  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   3.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 311 CSDCCLGDRCNYYIISGSRQNMPFNRII 394
           C DCC  DR  Y+I      N   N +I
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPLI 380


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 311 CSDCCLGDRCNYYIISGSRQNMPFNRII 394
           C DCC  DR  Y+I      N   N +I
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPLI 380


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 311 CSDCCLGDRCNYYIISGSRQNMPFNRII 394
           C DCC  DR  Y+I      N   N +I
Sbjct: 353 CPDCCPSDRMVYFITWLGYVNSALNPLI 380


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +2

Query: 191 SQGAKKQYY---ISKSCSNKTECPKTRQQNMPLC 283
           + G ++ YY   + K    +  CP  R    P+C
Sbjct: 45  NNGEEEAYYRKHLLKDADGRVSCPVLRAYTCPIC 78


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 135 NTTKMFV*PK----SDGVVLHIGPKGQRNNITYLKAV 233
           NT+K F+  +    SDG  L  GP+G + + T L+ +
Sbjct: 92  NTSKTFILSEKLESSDGTSLFRGPEGTQVSATELRKI 128


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 320 CCLGDRCNYYIISGSRQNMPFNRIILGL 403
           CC G     YI   SR   PF+ +IL +
Sbjct: 349 CCQGRATAIYIDKVSRFFFPFSFLILNV 376


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease
          precursor protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 69 SRLSTSRNEVMIKKTKIVALL 7
          + ++  +N V++KK KIV L+
Sbjct: 5  NNIAAFQNVVLVKKVKIVLLI 25


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = -3

Query: 192 DQYGVLPHLISVRQTSWLCSQGFMVFT 112
           + Y V  + ++   ++W+ +  F++FT
Sbjct: 17  ETYFVSAYNLNQEDSNWIITNSFIIFT 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,466
Number of Sequences: 438
Number of extensions: 2927
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)