Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320G02f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 60 6e-09
X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 59 8e-09
BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 59 8e-09
Y15793-1|CAA75785.1| 1500|Homo sapiens carbamoyl phosphate synth... 29 7.5
D90282-1|BAA14328.1| 1500|Homo sapiens carbamyl phosphate synthe... 29 7.5
BX640601-1|CAE45707.1| 706|Homo sapiens hypothetical protein pr... 29 7.5
AY317138-1|AAP84318.1| 1049|Homo sapiens CPS1 isoform protein. 29 7.5
AY167007-1|AAO31763.1| 1500|Homo sapiens carbamoylphosphate synt... 29 7.5
AF536523-1|AAN77181.1| 1500|Homo sapiens carbamylphosphate synth... 29 7.5
AF154830-1|AAD38072.1| 1500|Homo sapiens carbamyl phosphate synt... 29 7.5
AC008172-1|AAY14960.1| 1500|Homo sapiens unknown protein. 29 7.5
AB208800-1|BAD92037.1| 1510|Homo sapiens carbamoyl-phosphate syn... 29 7.5
AB180938-1|BAD74209.1| 1500|Homo sapiens carbamoylphosphate synt... 29 7.5
AB180936-1|BAD74207.1| 1500|Homo sapiens carbamoylphosphate synt... 29 7.5
AB180935-1|BAD74206.1| 1261|Homo sapiens carbamoylphosphate synt... 29 7.5
AB180934-1|BAD74205.1| 1500|Homo sapiens carbamoylphosphate synt... 29 7.5
AL833301-1|CAD91142.1| 1340|Homo sapiens hypothetical protein pr... 29 9.9
AL832455-1|CAD89926.1| 1308|Homo sapiens hypothetical protein pr... 29 9.9
AL832352-1|CAD91149.1| 1337|Homo sapiens hypothetical protein pr... 29 9.9
AL832014-1|CAD91147.1| 1264|Homo sapiens hypothetical protein pr... 29 9.9
AK057410-1|BAB71475.1| 778|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF209502-2|AAL40184.1| 1883|Homo sapiens ZFP106 protein. 29 9.9
AF205632-1|AAG35666.1| 1883|Homo sapiens zinc finger protein 106... 29 9.9
>AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type
C2 precursor variant protein.
Length = 151
Score = 59.7 bits (138), Expect = 6e-09
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Frame = +1
Query: 67 FETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIKFT 246
F + F+ LAL+ A V+ SV + K V + C PC L K + + FT
Sbjct: 3 FLAATFLLLALSTAAQAEPVQFRDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFT 62
Query: 247 PEKDVLDLKNSVSAKLFEIDLPFIGVDGTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDT 420
K V L + +PF I D KSG CP++ Y Y +
Sbjct: 63 SNVQSKSSKAVVHGILMGVPVPF----------PIPEPDGCKSGINCPIQKDKTYSYLNK 112
Query: 421 FPILSIYPSIQAEVTWALKAE-DKDVICFRVPVK 519
P+ S YPSI+ V W L+ + ++ + C+ +PV+
Sbjct: 113 LPVKSEYPSIKLVVEWQLQDDKNQSLFCWEIPVQ 146
>X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue
specific mRNA. ).
Length = 151
Score = 59.3 bits (137), Expect = 8e-09
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Frame = +1
Query: 67 FETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIKFT 246
F + F+ LAL+ A V+ SV + K V + C PC L K + + FT
Sbjct: 3 FLAATFLLLALSTAAQAEPVQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFT 62
Query: 247 PEKDVLDLKNSVSAKLFEIDLPFIGVDGTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDT 420
K V L + +PF I D KSG CP++ Y Y +
Sbjct: 63 SNIQSKSSKAVVHGILMGVPVPF----------PIPEPDGCKSGINCPIQKDKTYSYLNK 112
Query: 421 FPILSIYPSIQAEVTWALKAE-DKDVICFRVPVK 519
P+ S YPSI+ V W L+ + ++ + C+ +PV+
Sbjct: 113 LPVKSEYPSIKLVVEWQLQDDKNQSLFCWEIPVQ 146
>BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type
C2 protein.
Length = 151
Score = 59.3 bits (137), Expect = 8e-09
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Frame = +1
Query: 67 FETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIKFT 246
F + F+ LAL+ A V+ SV + K V + C PC L K + + FT
Sbjct: 3 FLAATFLLLALSTAAQAEPVQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFT 62
Query: 247 PEKDVLDLKNSVSAKLFEIDLPFIGVDGTSVCDKIHTEDDQKSG--CPLKAGTNYIYKDT 420
K V L + +PF I D KSG CP++ Y Y +
Sbjct: 63 SNIQSKSSKAVVHGILMGVPVPF----------PIPEPDGCKSGINCPIQKDKTYSYLNK 112
Query: 421 FPILSIYPSIQAEVTWALKAE-DKDVICFRVPVK 519
P+ S YPSI+ V W L+ + ++ + C+ +PV+
Sbjct: 113 LPVKSEYPSIKLVVEWQLQDDKNQSLFCWEIPVQ 146
>Y15793-1|CAA75785.1| 1500|Homo sapiens carbamoyl phosphate synthetase
1 protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>D90282-1|BAA14328.1| 1500|Homo sapiens carbamyl phosphate synthetase
I protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>BX640601-1|CAE45707.1| 706|Homo sapiens hypothetical protein
protein.
Length = 706
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 299 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 335
>AY317138-1|AAP84318.1| 1049|Homo sapiens CPS1 isoform protein.
Length = 1049
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 642 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 678
>AY167007-1|AAO31763.1| 1500|Homo sapiens carbamoylphosphate
synthetase protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AF536523-1|AAN77181.1| 1500|Homo sapiens carbamylphosphate synthetase
1 protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AF154830-1|AAD38072.1| 1500|Homo sapiens carbamyl phosphate
synthetase I protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AC008172-1|AAY14960.1| 1500|Homo sapiens unknown protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AB208800-1|BAD92037.1| 1510|Homo sapiens carbamoyl-phosphate
synthetase 1 variant protein.
Length = 1510
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1103 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1139
>AB180938-1|BAD74209.1| 1500|Homo sapiens carbamoylphosphate
synthetase I protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AB180936-1|BAD74207.1| 1500|Homo sapiens carbamoylphosphate
synthetase I protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AB180935-1|BAD74206.1| 1261|Homo sapiens carbamoylphosphate
synthetase I protein.
Length = 1261
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AB180934-1|BAD74205.1| 1500|Homo sapiens carbamoylphosphate
synthetase I protein.
Length = 1500
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 100 AAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLK 210
+AV+ V Q P K+V L++A++ + + PC+L+
Sbjct: 1093 SAVLDELKVAQAPWKAVNTLNEALEFAKSVDYPCLLR 1129
>AL833301-1|CAD91142.1| 1340|Homo sapiens hypothetical protein
protein.
Length = 1340
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 144 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 196
>AL832455-1|CAD89926.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 112 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 164
>AL832352-1|CAD91149.1| 1337|Homo sapiens hypothetical protein
protein.
Length = 1337
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 141 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 193
>AL832014-1|CAD91147.1| 1264|Homo sapiens hypothetical protein
protein.
Length = 1264
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 68 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 120
>AK057410-1|BAB71475.1| 778|Homo sapiens protein ( Homo sapiens
cDNA FLJ32848 fis, clone TESTI2003413, moderately
similar to Zinc finger protein 106. ).
Length = 778
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 432 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 484
>AF209502-2|AAL40184.1| 1883|Homo sapiens ZFP106 protein.
Length = 1883
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 687 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 739
>AF205632-1|AAG35666.1| 1883|Homo sapiens zinc finger protein 106
protein.
Length = 1883
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 61 IMFETSAFVCLALAAVVSATNVRQCPGKSVPELSKAVQLHECIKLPCVLKKNTDQHIVIK 240
+ +ET F +L A + +++ Q G +PELSK + P L+++ +HI +K
Sbjct: 687 VSYETEGFESASLDAELQKSDISQPSGPLLPELSK-------LGFPASLQRDLTRHISLK 739
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,998,257
Number of Sequences: 237096
Number of extensions: 1415084
Number of successful extensions: 2271
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2268
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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