Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320G02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 28 3.5
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 3.5
U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 181 ECIKLPCVLKKNTDQHIVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-VCDKIHT 357
+C+++ + +N + + DV+DLK + K+ + + V G VC + +
Sbjct: 295 QCVEVSALQSRNLPS-LQDALLLQADVMDLKATKKGKVEAVIIESSVVHGIGKVCTLVVS 353
Query: 358 EDDQKSGCPLKAGTNY 405
K GC L AG+++
Sbjct: 354 RGTLKKGCVLVAGSSW 369
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +1
Query: 229 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 393
I +K +P ++ LK + FE++ +G DGT + K ++ + + L
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344
Query: 394 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 483
G +YI + F I S P I T ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +1
Query: 229 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 393
I +K +P ++ LK + FE++ +G DGT + K ++ + + L
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344
Query: 394 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 483
G +YI + F I S P I T ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +1
Query: 229 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 393
I +K +P ++ LK + FE++ +G DGT + K ++ + + L
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344
Query: 394 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 483
G +YI + F I S P I T ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373
>U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical
protein C16D9.6 protein.
Length = 340
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 400 NYIYKDTFPILSIYPSIQAEVTWALKAED 486
N +K + IY +I +E W LKA+D
Sbjct: 155 NLFFKSRYAFHHIYTNISSEFDWYLKADD 183
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 331 TSVCDKIHTEDDQKSGCPLKAGTNYIYKDTFPILSIYPSIQAEVTWALK 477
T VC + ++Q S L Y++ +T + S+Y S + TW++K
Sbjct: 149 TGVCLPSNCHENQMSKL-LNLAKEYLFNETIHVDSVYCSHGTDSTWSVK 196
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 246 TRKRCLGFKKQCECEII*NRPTFYWCRRNVCLR 344
TR+ C+G CE E++ N P+ C +VC++
Sbjct: 106 TRQPCMG-SLHCEGEVLRNFPSELECDHDVCIK 137
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 246 TRKRCLGFKKQCECEII*NRPTFYWCRRNVCLR 344
TR+ C+G CE E++ N P+ C +VC++
Sbjct: 176 TRQPCMG-SLHCEGEVLRNFPSELECDHDVCIK 207
>AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical
protein Y39A3A.3 protein.
Length = 310
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 181 ECIKLPCVLKKNTDQHIVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTSVCDKIHTE 360
EC KLP VL + F E+D + N+V+ F++++ DG D++ T+
Sbjct: 169 ECCKLPKVLNFQCKPEFSLNFAAERDNREGPNAVTDS-FKLNISLTTSDGE---DEMLTQ 224
Query: 361 DDQKS 375
+++ +
Sbjct: 225 EERSA 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,685
Number of Sequences: 27780
Number of extensions: 237524
Number of successful extensions: 514
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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