Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS320F10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical pr... 130 6e-31
U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein. 130 6e-31
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 118 3e-27
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 118 3e-27
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 118 3e-27
Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical pr... 113 5e-26
U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein. 113 5e-26
Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical pr... 105 1e-23
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 89 1e-18
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 89 1e-18
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 75 2e-14
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 75 2e-14
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 0.38
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 31 0.66
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 30 0.87
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 29 2.0
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 29 2.0
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 2.7
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 2.7
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 2.7
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 29 2.7
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 3.5
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription... 28 4.7
AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related ... 28 4.7
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 28 4.7
AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein. 28 4.7
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 27 6.2
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 27 6.2
Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.1
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 27 8.1
>Z35639-3|CAA84695.2| 780|Caenorhabditis elegans Hypothetical protein
D2045.6 protein.
Length = 780
Score = 130 bits (314), Expect = 6e-31
Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = -3
Query: 483 VLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNIN-IPLKTELKVEQEATHKH 307
+ ++LKA + +EDE + + V L Y NKK+RV+++ +K + + E K+
Sbjct: 649 IKNLVLKADTELQKEDEVPM--TATVSLNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKN 706
Query: 306 IEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYL 127
+EEDRK +I A IVRIMKTRK ++HQ L+ EV+ QLS RFKP+V +IK+CI LIEKEY+
Sbjct: 707 VEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYM 766
Query: 126 ERTEGEKDTYSYLA 85
RTEG+KD Y YLA
Sbjct: 767 LRTEGQKDLYEYLA 780
>U58083-1|AAC47120.1| 780|Caenorhabditis elegans CUL-1 protein.
Length = 780
Score = 130 bits (314), Expect = 6e-31
Identities = 66/134 (49%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Frame = -3
Query: 483 VLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNIN-IPLKTELKVEQEATHKH 307
+ ++LKA + +EDE + + V L Y NKK+RV+++ +K + + E K+
Sbjct: 649 IKNLVLKADTELQKEDEVPM--TATVSLNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKN 706
Query: 306 IEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYL 127
+EEDRK +I A IVRIMKTRK ++HQ L+ EV+ QLS RFKP+V +IK+CI LIEKEY+
Sbjct: 707 VEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYM 766
Query: 126 ERTEGEKDTYSYLA 85
RTEG+KD Y YLA
Sbjct: 767 LRTEGQKDLYEYLA 780
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical protein
ZK520.4c protein.
Length = 791
Score = 118 bits (284), Expect = 3e-27
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Frame = -3
Query: 519 QHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP-LKT 343
+ G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P +
Sbjct: 649 EEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNK 706
Query: 342 ELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIK 163
++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P VP IK
Sbjct: 707 AVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIK 766
Query: 162 KCIDILIEKEYLERTEGEKDTYSYLA 85
K I+ LIEK Y++RT+ + D Y YLA
Sbjct: 767 KSIEDLIEKMYIQRTD-QNDEYQYLA 791
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical protein
ZK520.4b protein.
Length = 774
Score = 118 bits (284), Expect = 3e-27
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Frame = -3
Query: 519 QHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP-LKT 343
+ G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P +
Sbjct: 632 EEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNK 689
Query: 342 ELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIK 163
++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P VP IK
Sbjct: 690 AVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIK 749
Query: 162 KCIDILIEKEYLERTEGEKDTYSYLA 85
K I+ LIEK Y++RT+ + D Y YLA
Sbjct: 750 KSIEDLIEKMYIQRTD-QNDEYQYLA 774
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical protein
ZK520.4a protein.
Length = 850
Score = 118 bits (284), Expect = 3e-27
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Frame = -3
Query: 519 QHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP-LKT 343
+ G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P +
Sbjct: 708 EEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNK 765
Query: 342 ELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIK 163
++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P VP IK
Sbjct: 766 AVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPFIK 825
Query: 162 KCIDILIEKEYLERTEGEKDTYSYLA 85
K I+ LIEK Y++RT+ + D Y YLA
Sbjct: 826 KSIEDLIEKMYIQRTD-QNDEYQYLA 850
>Z92822-5|CAD45612.3| 743|Caenorhabditis elegans Hypothetical protein
ZK520.4d protein.
Length = 743
Score = 113 bits (273), Expect = 5e-26
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Frame = -3
Query: 519 QHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP-LKT 343
+ G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P +
Sbjct: 599 EEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNK 656
Query: 342 ELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPV 169
++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P VP
Sbjct: 657 AVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPF 716
Query: 168 IKKCIDILIEKEYLERTEGEKDTYSYLA 85
IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 717 IKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>U58084-1|AAC47121.1| 743|Caenorhabditis elegans CUL-2 protein.
Length = 743
Score = 113 bits (273), Expect = 5e-26
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Frame = -3
Query: 519 QHTGIKGDFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIP-LKT 343
+ G+ GD+L++ ++ +L LL C D+ L +S+V L +K+++ + P +
Sbjct: 599 EEIGVSGDYLLKTIRTILDVTLLTC--DDQNLTADSLVRLNMSMTSKRMKFRLQAPQVNK 656
Query: 342 ELKVEQEATHK--HIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPV 169
++ EQEA + +DRK ++ AIVRIMKTRK LKH LV E+++Q RF P VP
Sbjct: 657 AVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTKGRFSPDVPF 716
Query: 168 IKKCIDILIEKEYLERTEGEKDTYSYLA 85
IKK I+ LIEK Y++RT+ + D Y YLA
Sbjct: 717 IKKSIEDLIEKMYIQRTD-QNDEYQYLA 743
>Z77666-5|CAB01230.1| 729|Caenorhabditis elegans Hypothetical
protein K08E7.7 protein.
Length = 729
Score = 105 bits (253), Expect = 1e-23
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Frame = -3
Query: 417 NSVVDLYSGYKNKKLRVNINIPLK-TELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKT 241
++VV L + Y NKK+RV++ +K E +A +E DRK I+A IVRIMKTRK+
Sbjct: 618 DAVVSLNTKYANKKVRVDLTTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKS 677
Query: 240 LKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 85
L H L+ E+++QL SRF P V +IK CI+ILIE+ Y+ R+E E + Y YLA
Sbjct: 678 LTHTLLINEIISQLKSRFTPNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 89.4 bits (212), Expect = 1e-18
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = -3
Query: 441 EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKHIEEDRKMLIQAAIV 265
+D ++ + V+ +++K RV + + K E + E T + +E+DRK+ ++AAIV
Sbjct: 663 KDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIV 720
Query: 264 RIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 85
RIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL R E + Y Y+A
Sbjct: 721 RIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 780
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 89.4 bits (212), Expect = 1e-18
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = -3
Query: 441 EDEAELGENSVVDLYSGYKNKKLRVNINIPL-KTELKVEQEATHKHIEEDRKMLIQAAIV 265
+D ++ + V+ +++K RV + + K E + E T + +E+DRK+ ++AAIV
Sbjct: 660 KDAIDMSDEFAVN--DNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIV 717
Query: 264 RIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 85
RIMK RK L H +LV EV QL RF P +IK+ I+ LIE+EYL R E + Y Y+A
Sbjct: 718 RIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIEREYLARDEHDHRAYQYIA 777
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 75.4 bits (177), Expect = 2e-14
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = -3
Query: 444 QEDEAELGENSVVDLYSGYKNKKLRVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAI 268
+E E +N + S + K+ RV I + +KT ++ E + + + DR+ I AA+
Sbjct: 686 KEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAV 744
Query: 267 VRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYL 88
VRIMK RK L HQ L+ E+L QL RF IKK ++ LIE+EY+ R E +Y+Y+
Sbjct: 745 VRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYV 802
Query: 87 A 85
A
Sbjct: 803 A 803
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 75.4 bits (177), Expect = 2e-14
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = -3
Query: 444 QEDEAELGENSVVDLYSGYKNKKLRVNI-NIPLKTELKVEQEATHKHIEEDRKMLIQAAI 268
+E E +N + S + K+ RV I + +KT ++ E + + + DR+ I AA+
Sbjct: 723 KEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVE-ETKEVKEEVNSDRQYKIDAAV 781
Query: 267 VRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYL 88
VRIMK RK L HQ L+ E+L QL RF IKK ++ LIE+EY+ R E +Y+Y+
Sbjct: 782 VRIMKARKQLNHQTLMTELLQQL--RFPVSTADIKKRLESLIEREYISRDPEEASSYNYV 839
Query: 87 A 85
A
Sbjct: 840 A 840
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 65.3 bits (152), Expect = 3e-11
Identities = 35/104 (33%), Positives = 60/104 (57%)
Frame = -3
Query: 396 SGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVV 217
+G ++ +VN+ L+ L+ E H+ I R++ +Q IV+I+KTRKT L +
Sbjct: 662 NGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKTYTLAQLTM 721
Query: 216 EVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA 85
E++ L F P +IK+ ID LIE +Y+ER + +T+ Y++
Sbjct: 722 ELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>Z81085-3|CAB03115.1| 769|Caenorhabditis elegans Hypothetical
protein F46F3.4 protein.
Length = 769
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 324 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSR--FKPRVPV 169
++ +KH+EE + AA +++ RK +HQ L+ NQ+S++ +PR V
Sbjct: 213 QSLNKHLEEMYRRRQTAAAAALVEQRKMQQHQILLARAANQVSTQEVIRPRASV 266
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = -3
Query: 423 GENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRK 244
GE+ + N K ++N LK EL + A HK I +D++ I+ RIMK +
Sbjct: 397 GESEQTLIEKVKNNSKAVASLNAQLKNELSYTK-AVHKRILKDKEQCIEELENRIMKL-E 454
Query: 243 TLK 235
TLK
Sbjct: 455 TLK 457
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 348 KTELKVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQ 229
K E KVEQE + +E +RK I I +I K +KT K Q
Sbjct: 72 KKERKVEQEK--RRLENERKAEIVQKITKIHKLKKTKKRQ 109
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 30.3 bits (65), Expect = 0.87
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = -3
Query: 387 KNKK-LRVNINIPLKTEL-KVEQEATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVE 214
KN++ L+ N+ + + + K E+ K +EE K + + + + RKT++ E
Sbjct: 850 KNEEALKENLKLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKEREFRKTMEEMEQNEE 909
Query: 213 VLNQLSSRFKPRVPVIKKCIDILIEKE-YLERTEGEK 106
+ N L ++ + + K D+L E E +E+ EK
Sbjct: 910 IFNVLERKYNEQHKKVMKMNDVLREYERKIEQLNMEK 946
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Frame = -3
Query: 498 DFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVEQE 322
D + + +L K K+ + +E E L E ++V+ K + L+ K EL + E E
Sbjct: 208 DEIFSLQDLLGKTKVQLEEETEKVLQERTIVE---NLKAQFLKERKESTEKIELIQKEAE 264
Query: 321 ATHKHIEEDRKMLIQAAIVRI----MKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIK 163
K IEED + Q + K T+ HQ+ V+E L Q + + + +K
Sbjct: 265 DYRKRIEEDIRNRQQRHKKEVDAHQEKFSATVNHQNAVIEELTQTVKQKQSEIAELK 321
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = -3
Query: 420 ENSVVDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAA-IVRIMK-TR 247
E V +L K+ +L + + + EL+ + TH +EE K L A +R+M+ T
Sbjct: 18 ERRVTELQDENKSLRLTLALRTDCEHELERVRNETHPGVEELEKKLASAENEIRVMESTN 77
Query: 246 KTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYS 94
K L + +QL + R ++K ++ E E +E + Y+
Sbjct: 78 KEL--MATLATTRDQLGKMLRERNQLVKDVDELHEEIEKMESLYNKPADYA 126
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 444 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 268
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 2.7
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = -3
Query: 498 DFLIQVLQILLKAKLLVCQ--EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVE 328
+F +Q+ + K ++L + E EA+L + D N +L + L+ +L +
Sbjct: 1694 EFAVQMDKYREKCEVLTAKIAELEAQLQNPAEEDQQQKTSNVEL-----VKLRQQLANAQ 1748
Query: 327 QEATHKHIE-EDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPV 169
Q+ +++ DR+ LI +I + KT++ HL ++ + + R PRVP+
Sbjct: 1749 QDMRVQNLTISDREGLIAEYRHQIAEQTKTIEELHLKLKTFSAAARRTSPRVPM 1802
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 258 MKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEYLE-RTEGEKDTYSY 91
M +KTL+ V+ N KP VP+ KK + +K E KD YSY
Sbjct: 233 MFIKKTLEVNAFVINCYNHSKKAVKPEVPIWKKPFPGMKDKNLPEDEILRVKDLYSY 289
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 342 PSSTVCLYSRAAFCSCTPSRDRQPSSRQAQPRPLDTPTVS 461
P T L + + S + S D +P+ ++ +P P TPT S
Sbjct: 267 PGKTASLPTHSPHPSESNSEDDEPTLKKCKPEPSQTPTTS 306
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 444 QEDEAELGENSV-VDLYSGYKNKKLRVNINIPLKTELKVEQEATHKHIEEDRKMLIQAAI 268
+EDE E E V S K K R+ KT K E+EA + +EE+++ AA+
Sbjct: 345 EEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKEEKAAAAV 404
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 241 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 86
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 241 PEASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPG 86
P+A+A + Q QAQ++ Q+ + + E A R G PG
Sbjct: 339 PQAAAAQHAAQQQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAGRATTPG 390
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = -3
Query: 219 VEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERTEGEKDTYSYLA*SRHSQEER 58
+E+ N+ ++ F P PV+ ++ L K + + E ++A +H + E+
Sbjct: 47 IELFNEKAASFNPTKPVVAASVEPLYCKACRKSIKSENAMTDHVASKKHKENEK 100
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = -3
Query: 324 EATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRVPVIKKCIDIL 145
E H H++ +R++L+++ + MK R +++ ++ +N+L +P IKK ++
Sbjct: 170 EKYHHHVKNNREILLRSQSLAAMKIRIFFENRKGLIFEVNELIDPEVGNIP-IKKFREVT 228
Query: 144 IEK 136
+ K
Sbjct: 229 LTK 231
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 237 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 130
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>Z79754-1|CAB02090.1| 457|Caenorhabditis elegans Hypothetical
protein F25H2.1 protein.
Length = 457
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 495 FLIQVLQILLKAKLLVCQEDEAELGENSVVDLY-SGYKNKKLRVNINIPLKTELKVEQEA 319
F I V ++ LKAK+ V + + + E+ +D Y SG + + VN I + + KV +A
Sbjct: 254 FRINVSKLSLKAKVTVKEFTKNKRKEHYTIDAYVSG--SPYVFVNKKIGKRWKFKVHSDA 311
Query: 318 THKHIEE 298
+K I E
Sbjct: 312 HNKTISE 318
>AF153275-1|AAD54940.1| 301|Caenorhabditis elegans transcription
factor RUN protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 238 EASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPGVIAPL 71
E S +G +P ++ H+++ ++ D + R+ RGR+ HL + AP+
Sbjct: 62 EVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPM 117
>AF003145-2|AAB57715.2| 301|Caenorhabditis elegans Runt related
protein 1 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 238 EASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPGVIAPL 71
E S +G +P ++ H+++ ++ D + R+ RGR+ HL + AP+
Sbjct: 62 EVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPM 117
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 237 KHQHLVVEVLNQLSSRFKPRVPVIKKCIDILIEKEY 130
KH V EV N L S P++ KK I + + EY
Sbjct: 868 KHMKFVYEVRNLLESTAGPKIDTSKKGIVLQVTPEY 903
>AB027412-1|BAA77765.1| 301|Caenorhabditis elegans RNT-1 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -2
Query: 238 EASALSGGSPQPVVVTVQAQSSCHQEMYRYTD*EGIFRAHRGREGHLQLPGVIAPL 71
E S +G +P ++ H+++ ++ D + R+ RGR+ HL + AP+
Sbjct: 62 EVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSAPM 117
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 6.2
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +1
Query: 259 YPYYGGLYKHLSVLLNVFV 315
+PYYGGLY + ++ +N ++
Sbjct: 117 FPYYGGLYNYTTISVNGYL 135
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 6.2
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 441 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 283
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 282 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 115
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 114 GEKDTY 97
E++T+
Sbjct: 279 YERETF 284
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.5 bits (58), Expect = 6.2
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 441 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 283
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 282 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 115
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 114 GEKDTY 97
E++T+
Sbjct: 279 YERETF 284
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 27.5 bits (58), Expect = 6.2
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Frame = -3
Query: 441 EDEAELGENSVVDLYSGYKNKKLRVNINIPLKTELKV----EQEATHKHIEEDRKM---L 283
E+ L E + L S N+ LR I + L V ++ + I+ + K+ L
Sbjct: 159 ENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKMEGKVGGRL 218
Query: 282 IQAAIVRIMKTRKTLKHQHLVVEVLNQ----LSSRFKPRVPVIKKCIDILIEKEYLERTE 115
+V+ + KT+ H + E+ N L+ F+P P K +DI +++ +
Sbjct: 219 EDTILVKGIVIDKTMSHPQMPKELKNAKVAILTCPFEPPKPKTKHKLDITSTEDFKALRD 278
Query: 114 GEKDTY 97
E++T+
Sbjct: 279 YERETF 284
>Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical
protein F57F5.4a protein.
Length = 611
Score = 27.1 bits (57), Expect = 8.1
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = -3
Query: 498 DFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVEQE 322
+FLIQ L + K L+ + + + S++ Y VN + PL+ E
Sbjct: 22 NFLIQRLAEVSNRKCLLLPKKKNRVDYISIMQTAEFYPEL---VNSSPPLEPGFTSCEVF 78
Query: 321 ATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRV 175
K +++D L + I TR+TL+ QH +N+ S F P +
Sbjct: 79 VVDKKVDKDTLHLDNFSPYHIGATRRTLERQHSYFYRVNE-SGNFVPAI 126
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
protein ZK783.1 protein.
Length = 2585
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 367 EYKHTVE-DGA*S*TRGYTQTH*GGQKDAYTGRHSTDNENAQDPEASALSGGS 212
E K TVE DG + + G + T G + +A +G S+ ++ EAS SG S
Sbjct: 790 EEKLTVEKDGKEAQSSGSSATSSGKKSEATSGSSSSSAKSGTGSEASGSSGAS 842
>AF166171-1|AAD49860.1| 611|Caenorhabditis elegans
adducin-head-domain-related protein protein.
Length = 611
Score = 27.1 bits (57), Expect = 8.1
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = -3
Query: 498 DFLIQVLQILLKAKLLVCQEDEAELGENSVVDLYSGYKNKKLRVNINIPLKTEL-KVEQE 322
+FLIQ L + K L+ + + + S++ Y VN + PL+ E
Sbjct: 22 NFLIQRLAEVSNRKCLLLPKKKNRVDYISIMQTAEFYPEL---VNSSPPLEPGFTSCEVF 78
Query: 321 ATHKHIEEDRKMLIQAAIVRIMKTRKTLKHQHLVVEVLNQLSSRFKPRV 175
K +++D L + I TR+TL+ QH +N+ S F P +
Sbjct: 79 VVDKKVDKDTLHLDNFSPYHIGATRRTLERQHSYFYRVNE-SGNFVPAI 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,809,033
Number of Sequences: 27780
Number of extensions: 246124
Number of successful extensions: 984
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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